Pairwise Alignments

Query, 243 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 237 a.a., lipoprotein-releasing ABC transporter ATP-binding protein LolD from Rhodanobacter sp. FW510-T8

 Score =  194 bits (493), Expect = 1e-54
 Identities = 105/231 (45%), Positives = 150/231 (64%), Gaps = 2/231 (0%)

Query: 1   MSEPMIKHNSAEVLRLDQVRKAFNVGTPLETEVLHGIDLSLYRGELAALIGPSGSGKSTL 60
           M++ ++   +  VLR   V K ++ G  L T+VL  +  +L RGE  A++G SGSGKSTL
Sbjct: 1   MNKAVMNPTTENVLRASHVAKTYDEGG-LRTDVLSDVSFTLKRGETMAIVGASGSGKSTL 59

Query: 61  LNLIGLLDAPSSGELYLLGQATRDSDDETRTHLRNQAIGFVFQFHHLISAFSVLENVLMP 120
           L++IG LD  S+GE+ + G+      D  R  +RN+++GF++QFHHL+  F+ LENV MP
Sbjct: 60  LHIIGGLDTLSAGEVEVDGRVLSKLSDAERGRVRNRSLGFIYQFHHLLPEFTALENVCMP 119

Query: 121 LMIRHGKPSPADIELARGLLDEVGLGAFADKKPTQISGGQQQRVAIARALVTRPPLLLAD 180
           L+IR    + A  + A  LL+ VGLG     KP+++SGG++QR A+ARALVTRP  +L D
Sbjct: 120 LLIRGTAIAEAQ-QQAVALLERVGLGRRTHHKPSELSGGERQRCAVARALVTRPACVLGD 178

Query: 181 EPTGNLDTRTAQSVFELFHRINAQFGCAVLVVTHDPRLAADCARTIQLVDG 231
           EPTGNLD   A  V+ L   +N + G + ++VTHDP LAA   RT+ L +G
Sbjct: 179 EPTGNLDEGNAAQVYALMLELNREIGTSFVLVTHDPHLAAKMDRTLVLHNG 229