Pairwise Alignments

Query, 243 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 227 a.a., lipoprotein-releasing ABC transporter ATP-binding protein LolD from Pseudomonas sp. SVBP6

 Score =  198 bits (504), Expect = 7e-56
 Identities = 110/223 (49%), Positives = 147/223 (65%), Gaps = 4/223 (1%)

Query: 13  VLRLDQVRKAFNVGTPLETEVLHGIDLSLYRGELAALIGPSGSGKSTLLNLIGLLDAPSS 72
           VL    + K++  G P + +VL G+ L L+ GE  A++G SGSGKSTLLNL+G LD PS 
Sbjct: 6   VLSCRNLGKSYEEG-PEKVQVLSGLQLELHPGERVAIVGSSGSGKSTLLNLLGGLDTPSE 64

Query: 73  GELYLLGQATRDSDDETRTHLRNQAIGFVFQFHHLISAFSVLENVLMPLMIRHGKPS-PA 131
           G ++L G+      +  R  LRN+A+GFV+QFHHL+  F+ LENV MPL+I  G+ + P 
Sbjct: 65  GSVWLAGEELSALGERARGLLRNRALGFVYQFHHLLPEFTALENVCMPLLI--GRTAIPE 122

Query: 132 DIELARGLLDEVGLGAFADKKPTQISGGQQQRVAIARALVTRPPLLLADEPTGNLDTRTA 191
             E A+ LL  VGLG     KP ++SGG++QRVAIARALV RP L++ DEPTGNLD  TA
Sbjct: 123 ARERAQALLKRVGLGHRLSHKPAELSGGERQRVAIARALVNRPGLVMLDEPTGNLDHHTA 182

Query: 192 QSVFELFHRINAQFGCAVLVVTHDPRLAADCARTIQLVDGHIV 234
           Q + +L   +++    A LVVTHD  LA    R ++L DGH+V
Sbjct: 183 QGIQDLMQELSSASQTAFLVVTHDLNLARQMDRVLRLDDGHLV 225