Pairwise Alignments

Query, 243 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 228 a.a., Uncharacterized metabolite ABC transporter in Enterobacteriaceae, ATP-binding protein EC-YbbA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  187 bits (476), Expect = 1e-52
 Identities = 108/229 (47%), Positives = 145/229 (63%), Gaps = 5/229 (2%)

Query: 5   MIKHNSAEVLRLDQVRKAFNVGTPLETEVLHGIDLSLYRGELAALIGPSGSGKSTLLNLI 64
           M   NS EV RL   RK+   G   E  +L G++L + RGE  ALIG SGSGKSTLL ++
Sbjct: 1   MPAENSVEVHRL---RKSVGQGEH-ELSILTGVELVVKRGETIALIGESGSGKSTLLAIL 56

Query: 65  GLLDAPSSGELYLLGQATRDSDDETRTHLRNQAIGFVFQFHHLISAFSVLENVLMPLMIR 124
             LD  SSGE+ L+G+     D+E R  LR Q +GFVFQ   LI   + LENV +P ++R
Sbjct: 57  AGLDDGSSGEVSLVGKPLHQMDEEARAQLRAQHVGFVFQSFMLIPTLNALENVELPALLR 116

Query: 125 HGKPSPADIELARGLLDEVGLGAFADKKPTQISGGQQQRVAIARALVTRPPLLLADEPTG 184
            G+ S      A+ LL+++GLG   D  P Q+SGG+QQRVA+ARA   RP +L ADEPTG
Sbjct: 117 -GENSGQSKAGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTG 175

Query: 185 NLDTRTAQSVFELFHRINAQFGCAVLVVTHDPRLAADCARTIQLVDGHI 233
           NLD +T   + +L   +N + G  +++VTHDP LAA C R ++LV+G +
Sbjct: 176 NLDRQTGDKIADLLFSLNREHGTTLILVTHDPALAARCDRRLRLVNGQL 224