Pairwise Alignments

Query, 248 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 262 a.a., putative Periplasmic binding protein from Pseudomonas putida KT2440

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 13/191 (6%)

Query: 9   IVLLLCSHARAELPDDYRVVLLTENFPPFNMAEDNKNYAADAKIHGINADIVREMFRRAN 68
           I+LL+C    + L    R+ L+T+++ P+    + +         GI+ ++  ++F R  
Sbjct: 10  ILLLVCL---SPLALGERLRLVTDDWAPYVFQHNGQP-------RGIDYEVASQVFARLG 59

Query: 69  IRYELSLRFPWDRIYKQVLEQPDQGLFSTTFTAEREPQFKW-VGPLASISWVLLAPSDSP 127
           +  E     PW R      +    G+     T  R+P   +   P++ + +VL       
Sbjct: 60  VEVEWQF-LPWKRCLAMAEQGLADGILDIFQTDARQPYMVYGAEPMSEVEFVLFQSRSRR 118

Query: 128 LRLTGLEEARNLRIGAYKNDAVSQHLESKGLAPINSLRDQE-NVGKLLKGQIDVWATADP 186
             +T L++   L +G     A  +           +   QE N GKL+ G+ID+  T   
Sbjct: 119 HAVTHLDDLAGLTVGTSPGYAYGKGFTEAPHFKREAAPTQEANFGKLILGRIDLVITDRR 178

Query: 187 VGPYLAKQEGV 197
           VG YL +Q G+
Sbjct: 179 VGHYLLRQLGL 189