Pairwise Alignments

Query, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

Subject, 1102 a.a., PAS-domain containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  791 bits (2044), Expect = 0.0
 Identities = 481/1157 (41%), Positives = 694/1157 (59%), Gaps = 73/1157 (6%)

Query: 3    LSGGLIAAVALVYMAILFAIAFYGDRNRDSMSPRLRPW--VYSLSLAVYCTSWTFFGAVG 60
            LS  +IA  AL ++ +LF +A  G+R       R   W  VY+LSLA++CTSWTF+G V 
Sbjct: 2    LSASVIAIAALCWLGLLFGVALLGERRPHIFEKR---WAIVYALSLAIHCTSWTFYGTVT 58

Query: 61   QSTEQLWAFLPIYLGPILLMLFAPHVIQKMIMISKQENITSIADFIAARYGKSQVLAVVV 120
            Q++   W   P ++G IL+ LFA   +++M+ + ++ N  S+AD IA R G+   LA +V
Sbjct: 59   QASRSGWWLPPTFVGAILMYLFALGFLRRMVQLVREYNAGSLADLIAVRLGRHPGLAALV 118

Query: 121  TLICLVGVLPYIALQLKGIVLGVNVLSGINVEAAGTGTRDTALIVSIVLALFTILFGTRN 180
            T++ ++G++PYIALQLK + +   +LS   + A  +  +D+AL V++++ALF +LFGTR 
Sbjct: 119  TVVVVIGIVPYIALQLKAVAMSYGILSHGQL-AESSPWQDSALYVALLMALFAMLFGTRR 177

Query: 181  LDVTEHHRGMVLAIAFESLVKLLAFLAVGAFVTFGLYNGFGDLFNRAHDAPELADFWSEN 240
                 H+RG+VLA+AFESL KL A LA+G  +   L            D P       ++
Sbjct: 178  ASTMAHNRGLVLAMAFESLFKLGAMLALGTLLFAAL----------PADLPANVPAPPDS 227

Query: 241  VNWAAMLVQTTVAMMAIVCLPRQFHVSVVENIEPRDFRLARWVFPLYLVLAAVFVVPIAL 300
              + A+++   +AM     +P QF+  +VE  E    R ARW+FPLYL+L ++ ++P+A 
Sbjct: 228  SGFPALILLGALAMFT---MPHQFYAGIVECREDGQLRTARWLFPLYLLLISLPILPLAR 284

Query: 301  AGQMLLPA-GVTPDSFVISLPLAELHPWLALLAFIGGASAATGMVIVASVALSTMVSNDM 359
             G   L A GV+ D +V++LPLA     LAL+AF+GG SAAT MV++A++ LS MV N  
Sbjct: 285  LGDAWLGASGVSSDMYVLALPLARGEHGLALVAFLGGLSAATSMVVIATLTLSLMVVNHF 344

Query: 360  LLPWLLRRQEAERPFEAFRHWMLSVRRITIVAILLLAYVSYRLLGSTASLATIGQIAFAA 419
            + P  +R           R  +L+ RR+ I+ ++LLA+   RLL    +LA IG I+F+A
Sbjct: 345  VAPLRVRAGWGRDEHGDLRGELLNYRRVAILVVILLAWAYSRLLAGNEALADIGAISFSA 404

Query: 420  ITQLAPAMVGALYWKQANRRGVFAGLTAGAAIWFYTLILPLLG----WPLDMFPGLSWMY 475
            +  L PA++ A+Y  Q   R V AGL AG  +W Y ++  LL     W  D   GL W+ 
Sbjct: 405  LAGLTPALLAAVYRPQLGSRAVMAGLAAGTLVWLYAVLPALLSSMPAWLHDGPFGLHWLA 464

Query: 476  NGGLGFGLSGLTLGVTLSLIGNATLFFWVSILTQTHVAEHWQASRFIGQEITSPTGARRL 535
              GL      L LG   + +G A +   VS+L    V      SR+     T   G   L
Sbjct: 465  PDGL------LGLG-NWNRLGRAVV---VSLLLNVAVMLAMAGSRYGRVARTVSVGDVGL 514

Query: 536  LAVRVEDLLTLASRFVGAERAEQSFQRFARRHGQDFTPKLQADGQWIAHTERLLAGVLGA 595
            + +R      LA+RF+  ER E  F   A   G        A    +A  E  LA V+GA
Sbjct: 515  VELRA-----LAARFLPPERVEYLFAS-APAAGP-------AGSARVAEVEHELAAVIGA 561

Query: 596  SSTRAVVKAA-LEGRDMQVDDVVRIVGEASEVLQFNRALLQGAIENITQGISVVDQSLRL 654
            +S R +++    +GRD  +D VV IVGEA++ L+FN+ +L+ A+EN++QGI VVD  LRL
Sbjct: 562  ASARLLLEVVHRQGRD-DLDTVVAIVGEAAQDLRFNQRVLEAALENMSQGICVVDAELRL 620

Query: 655  VAWNHRYLELFEYPDGLVYIGRPIADIIRYNAERGLCGPGDPDTHVAKRLYWMRQGRAHT 714
            VAWN  Y  LF+YP  ++ +GRP+A++ R+N + G+ GPG+ +  V +RL  MR+G  H 
Sbjct: 621  VAWNTPYARLFDYPPEMLQVGRPVAELTRHNIDIGMLGPGEVEQRVQRRLAHMREGTRHL 680

Query: 715  SERLFPNGRVVELIGNPMPGGGFVMSFSDITAYREAERALKDANEGLEQRVSERTQELSQ 774
            SER FP+G +VE+ GNPMPGGGFV +F+D+TA+R+AE ALK  NE LE RV  RT+EL+ 
Sbjct: 681  SERRFPDGTIVEIRGNPMPGGGFVATFTDVTAFRQAEAALKRINETLELRVEARTRELA- 739

Query: 775  LNQALIEAKSTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQQSALPREAQELVQ 834
                   A + A+AAN++K+RFLAAV+HDLMQPL+AA+LF+ AL+ +            +
Sbjct: 740  ------AASAEAQAANEAKSRFLAAVTHDLMQPLHAAQLFAHALTERGGDAAN-----AR 788

Query: 835  HLDSSLRSAEDLITDLLDISRLESGRVTPDRNPFPLATLFDTLGTEFTVLAREQGVNFRV 894
            HL+ +L + E L+T LLD++RLE GR+ P    F LA + D L  EF  +A ++GV   V
Sbjct: 789  HLNGALAATEGLLTGLLDVARLEGGRLHPQPRAFALAEVLDPLAAEFRAIAIDRGVRLDV 848

Query: 895  HGSKLRVDSDIRLLRRVLQNFLTNAFRYA-KGRVVLGVRRQGASLRLEVWDRGPGIPQDK 953
             G++  V SD +LLRRVLQNFL+NA RY  +GRV+LG RR+G  LR+EVWD GPGI  ++
Sbjct: 849  VGTRAWVRSDPQLLRRVLQNFLSNALRYGERGRVLLGTRRRGGQLRIEVWDTGPGIAPEE 908

Query: 954  LKVIFEEFKRLDSHQTRAEKGLGLGLAIADGLCHVLEHPLEVRSWPGKGSVFSVTVPIAR 1013
             ++IF+EF+R         +GLGLGL+IA  +  +L HPL +RSWPG+GSVF V  P+A+
Sbjct: 909  QRLIFQEFRR---GSAAGGQGLGLGLSIAQRMADLLGHPLGLRSWPGRGSVFHVDAPVAQ 965

Query: 1014 ALSQPRPVVKRGEPQHSALTGTQVLCIDNEDSILVGMSSLLTRWGCQVWTASNRDECEAL 1073
            A+++  P     +P    L   + L +DNE + L  + SLL  WG  V  A N    E  
Sbjct: 966  AVARSAPPAHAQQP----LPAGRALLLDNEPAALAALGSLLAGWGWHVHVARN---AEQA 1018

Query: 1074 LAEDIRPQLVLVDYHLDEGQTGTELMAWLRTRLGEPVPGVVISADGRPELIAAIHASGLD 1133
            LA   RP L ++D+HLD GQTG ++   LR R  + VP V+++AD   EL   +  +G+ 
Sbjct: 1019 LAAPWRPDLHILDFHLDGGQTGLDVWHLLRARYAD-VPTVMLTADRDGELRQRLLEAGVG 1077

Query: 1134 FLAKPVKPAALRALMSR 1150
             L KP+KP ALR ++ R
Sbjct: 1078 VLYKPLKPLALRQVLQR 1094