Pairwise Alignments

Query, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

Subject, 1156 a.a., Sensory box histidine kinase/response regulator from Pseudomonas fluorescens GW456-L13

 Score = 1782 bits (4615), Expect = 0.0
 Identities = 904/1158 (78%), Positives = 1008/1158 (87%), Gaps = 6/1158 (0%)

Query: 1    MKLSGGLIAAVALVYMAILFAIAFYGDRNRDSMSPRLRPWVYSLSLAVYCTSWTFFGAVG 60
            M LS GLIA VAL YMAILFAIAFYGDR    + PR+R WVYSLSLAVYCTSWTFFGAVG
Sbjct: 1    MSLSTGLIAVVALAYMAILFAIAFYGDRRSAPLPPRVRAWVYSLSLAVYCTSWTFFGAVG 60

Query: 61   QSTEQLWAFLPIYLGPILLMLFAPHVIQKMIMISKQENITSIADFIAARYGKSQVLAVVV 120
            Q+ EQLW+FLPIYLGPILL++ AP V+QKM+MISKQENITSIADFIAARYGKSQ LAVVV
Sbjct: 61   QAAEQLWSFLPIYLGPILLLVGAPWVLQKMVMISKQENITSIADFIAARYGKSQSLAVVV 120

Query: 121  TLICLVGVLPYIALQLKGIVLGVNVLSGINVEAAGTGTRDTALIVSIVLALFTILFGTRN 180
             LICLVGVLPYIALQLKGIVLGVN+L G   +A GT  +DTALIVS+VLALFTI+FGTRN
Sbjct: 121  ALICLVGVLPYIALQLKGIVLGVNLLIGAGADAMGTRAQDTALIVSLVLALFTIVFGTRN 180

Query: 181  LDVTEHHRGMVLAIAFESLVKLLAFLAVGAFVTFGLYNGFGDLFNRAHDAPELADFWSEN 240
            LD TEHHRGMVLAIAFESLVKL AFLAVGAFVT+GLY+GF DLF++A  AP L  +W E 
Sbjct: 181  LDATEHHRGMVLAIAFESLVKLFAFLAVGAFVTYGLYDGFDDLFDQAMLAPRLEQYWKET 240

Query: 241  VNWAAMLVQTTVAMMAIVCLPRQFHVSVVENIEPRDFRLARWVFPLYLVLAAVFVVPIAL 300
            +NW +M+VQT VAMMAI+CLPRQFHV+VVENI+P+D RLA+WVFP YL LAA+FVVPIAL
Sbjct: 241  INWPSMVVQTGVAMMAIICLPRQFHVTVVENIDPQDLRLAKWVFPAYLALAALFVVPIAL 300

Query: 301  AGQMLLPAGVTPDSFVISLPLAELHPWLALLAFIGGASAATGMVIVASVALSTMVSNDML 360
            AGQM+LP+ V PDSFVISLPLA+ HP LALLAFIGGASAATGMVIVASVALSTMVSNDML
Sbjct: 301  AGQMMLPSSVLPDSFVISLPLAQAHPALALLAFIGGASAATGMVIVASVALSTMVSNDML 360

Query: 361  LPWLLRRQEAERPFEAFRHWMLSVRRITIVAILLLAYVSYRLLGSTASLATIGQIAFAAI 420
            LPWLLRR  AERPFE FR WMLSVRR++IV ILLLAYVSYRLLGSTASLATIGQIAFAA+
Sbjct: 361  LPWLLRRNNAERPFEVFRQWMLSVRRVSIVVILLLAYVSYRLLGSTASLATIGQIAFAAV 420

Query: 421  TQLAPAMVGALYWKQANRRGVFAGLTAGAAIWFYTLILPL----LGWPLDMFPGLSWMYN 476
            TQLAPAM+GALYWKQANRRGVFAGL AG  +WFYTLILP+    LG  L+ FPGL+W+++
Sbjct: 421  TQLAPAMLGALYWKQANRRGVFAGLAAGTFLWFYTLILPIAALSLGLSLNTFPGLAWLHS 480

Query: 477  GGLGFGLSGLTLGVTLSLIGNATLFFWVSILTQTHVAEHWQASRFIGQEITSPTGARRLL 536
              L   ++ LT GV LSL GN TLF WVS+L++T V+EHWQA RFIGQEI++   AR +L
Sbjct: 481  NPLNLPITPLTQGVVLSLAGNFTLFAWVSVLSRTRVSEHWQAGRFIGQEISARPSARSML 540

Query: 537  AVRVEDLLTLASRFVGAERAEQSFQRFARRHGQDFTPKLQADGQWIAHTERLLAGVLGAS 596
            AV++ DLL LA+RFVG ERA QSF RFA R G+ F P   AD +WIAHTERLLAGVLGAS
Sbjct: 541  AVQINDLLQLAARFVGEERARQSFIRFAYRQGKGFNPNQNADSEWIAHTERLLAGVLGAS 600

Query: 597  STRAVVKAALEGRDMQVDDVVRIVGEASEVLQFNRALLQGAIENITQGISVVDQSLRLVA 656
            STRAVVKAA+EGR+MQ++DVVRI  EASEVLQFNRALLQGAIENITQGISVVDQSL+LVA
Sbjct: 601  STRAVVKAAIEGREMQLEDVVRIADEASEVLQFNRALLQGAIENITQGISVVDQSLKLVA 660

Query: 657  WNHRYLELFEYPDGLVYIGRPIADIIRYNAERGLCGPGDPDTHVAKRLYWMRQGRAHTSE 716
            WN RYLELF YPDGL+ IGRPIADIIRYNAERGLCGPG+ + HVA+RL+WMRQGRAHTSE
Sbjct: 661  WNRRYLELFNYPDGLISIGRPIADIIRYNAERGLCGPGEAEVHVARRLHWMRQGRAHTSE 720

Query: 717  RLFPNGRVVELIGNPMPGGGFVMSFSDITAYREAERALKDANEGLEQRVSERTQELSQLN 776
            R+FPNGRV+ELIGNPMPGGGFVMSF+DITA+REAE+AL +ANEGLEQRV+ERT ELSQLN
Sbjct: 721  RMFPNGRVIELIGNPMPGGGFVMSFTDITAFREAEQALTEANEGLEQRVTERTHELSQLN 780

Query: 777  QALIEAKSTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQQSALPREAQELVQHL 836
             AL EAK TAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQ+  L  EAQ+LV HL
Sbjct: 781  VALTEAKGTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQEDGLSGEAQKLVGHL 840

Query: 837  DSSLRSAEDLITDLLDISRLESGRVTPDRNPFPLATLFDTLGTEFTVLAREQGVNFRVHG 896
            DSSLRSAEDLI+DLLDISRLE+G++ P+R PF L  LFDTLGTEF VLAREQ + FRV  
Sbjct: 841  DSSLRSAEDLISDLLDISRLENGKINPNRQPFALNELFDTLGTEFKVLAREQKLEFRVRT 900

Query: 897  SKLRVDSDIRLLRRVLQNFLTNAFRYAKGRVVLGVRRQGASLRLEVWDRGPGIPQDKLKV 956
            S LRVDSDI+LLRR+LQNFLTNAFRY KG V+LGVRR    L LEVWDRGPGIP+DKL+V
Sbjct: 901  STLRVDSDIKLLRRILQNFLTNAFRYGKGPVLLGVRRHKEQLCLEVWDRGPGIPEDKLQV 960

Query: 957  IFEEFKRLDSHQTRAEKGLGLGLAIADGLCHVLEHPLEVRSWPGKGSVFSVTVPIARALS 1016
            IFEEFKRLDSHQTRAEKGLGLGLAIADGLC VL H L VRSWPG+GSVFSV+VP+ARA  
Sbjct: 961  IFEEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHTLRVRSWPGRGSVFSVSVPLARA-- 1018

Query: 1017 QPRPVVKRGEPQHSALTGTQVLCIDNEDSILVGMSSLLTRWGCQVWTASNRDECEALLAE 1076
            Q    VK  E     L G QVLCIDNEDSIL+GM+SLL+RWGCQVWTA NR+EC ALL E
Sbjct: 1019 QTAAPVKVAEFNGKLLNGAQVLCIDNEDSILIGMNSLLSRWGCQVWTARNREECAALLGE 1078

Query: 1077 DIRPQLVLVDYHLDEGQTGTELMAWLRTRLGEPVPGVVISADGRPELIAAIHASGLDFLA 1136
             +RPQL LVDYHLD G+TGT+LMAWLRT++GEPVPGVVISADGRPE +  +HA+GLD+LA
Sbjct: 1079 GMRPQLALVDYHLDHGETGTDLMAWLRTQMGEPVPGVVISADGRPETVDLVHAAGLDYLA 1138

Query: 1137 KPVKPAALRALMSRHLTL 1154
            KPVKPAALRAL+SR++ L
Sbjct: 1139 KPVKPAALRALLSRYIPL 1156