Pairwise Alignments

Query, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

Subject, 982 a.a., Two-component sensor CbrA: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens GW456-L13

 Score =  295 bits (756), Expect = 9e-84
 Identities = 275/1055 (26%), Positives = 462/1055 (43%), Gaps = 148/1055 (14%)

Query: 11   VALVYMAILFAIAFYGDRNRDSMSPRLRPWVYSLSLAVYCTSWTFFGAVGQSTEQLWAFL 70
            ++  Y+A+LF +A+  +R     +    P  Y+LSL VY ++W F+G VG + +  + FL
Sbjct: 11   ISAAYLAVLFGVAWISERGMIPRAIIRHPLTYTLSLGVYASAWAFYGTVGLAYQYGYGFL 70

Query: 71   PIYLGPILLMLFAPHVIQKMIMISKQENITSIADFIAARYGKSQVLAVVVTLICLVGVLP 130
              YLG     L AP ++  ++ I++   ++S+AD  A R+ +S     + T+  LVGVLP
Sbjct: 71   SSYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLFAFRF-RSTWAGALTTIFMLVGVLP 129

Query: 131  YIALQLKGIVLGVNVLSGINVEAAGTGTRDTALIVSIVLALFTILFGTRNLDVTEHHRGM 190
             +ALQ++ +   +++L+   V+         AL    ++ LFTI FG+R++   E H G+
Sbjct: 130  LLALQIQAVADSISILTREPVQ------HRVALSFCALITLFTIFFGSRHIATREKHEGL 183

Query: 191  VLAIAFESLVKLLAFLAVGAFVTFGLYNGFGDLFNRAHDAPELADFWSENVNWAAMLVQT 250
            V AIAFES++KL+A   VG +  +G+++G           P+  + W      A   + T
Sbjct: 184  VFAIAFESVIKLIALGGVGLYALYGVFDG-----------PQQLELWLLQNQTALAALHT 232

Query: 251  T-----------VAMMAIVCLPRQFHVSVVENIEPRDFRLARWVFPLYLVLAAVFVVPIA 299
                        V   + + +P  +H++  EN+ PR    A W  PL+L+L ++  VP+ 
Sbjct: 233  PLQEGPWRTLLLVFFASAIVMPHMYHMTFTENLNPRSLVSASWGLPLFLLLMSL-AVPLI 291

Query: 300  LAGQMLLPAGVTPDSFVISLPLAELHPWLALLAFIGGASAATGMVIVASVALSTMVSNDM 359
            L   + L A   P+ F + + +A     LALLA++GG SAA+G++IV ++ALS M  N +
Sbjct: 292  LWAGLKLGATTNPEYFTLGIGIAANSKALALLAYVGGLSAASGLIIVTTLALSGMALNHL 351

Query: 360  LLPWLLRRQEAERPFEAFRHWMLSVRRITIVAILLLAYVSYRLLGSTASLATIGQIAFAA 419
            +LP      E          W+   RR  IVAI++  Y  Y +LG+   LA +G +AF A
Sbjct: 352  VLPLYQPPAEGN-----IYRWLKWTRRALIVAIIMAGYGFYLMLGAEQDLANLGIVAFVA 406

Query: 420  ITQLAPAMVGALYWKQANRRGVFAGLTAGAAIWFYTLILPLLGWPLDMF-PGLSWMYNGG 478
              Q  P ++  LYW  ANRRG  AGL AG  +W  T++LPL+G     + P L+ +Y   
Sbjct: 407  TLQFLPGVLSVLYWPTANRRGFIAGLLAGILVWLVTMLLPLVGNLQGFYIPLLNMIY--- 463

Query: 479  LGFGLSGLTLGVTLSLIGNATLFFWVSILTQTHVAEHWQASRFIGQEITSPTGARRLLAV 538
                 +   +    SL  N  +F  +S+ T     E   A       +  P   R L A 
Sbjct: 464  -VLDDTSWHMAAIASLAANVLMFTLISLFTNASTEEASAAEACAVDNVRRPQ-RRELHAA 521

Query: 539  RVEDLLTLASRFVGAERAEQSFQRFARRHGQDFTPKL-QADGQWIAHTERLLAGVLGASS 597
              ++  T  ++ +GA+ A++  ++  R     F  +   A  +     E  L+G++G S 
Sbjct: 522  SPQEFATQLAKPLGAKAAQKEVEQALRDLYLPFDERRPYALRRLRDRIEANLSGLMGPSV 581

Query: 598  TRAVVKAALE----GRDMQVDDV-----------VRIVGEASEVLQFNRALLQGAIENIT 642
             + +V+  L     G +   +D+            R+ G A+E+    R   Q  ++ + 
Sbjct: 582  AQDMVETFLPYKAGGENYVTEDIHFIESRLEDYHSRLTGLAAELDALRRYHRQ-TLQELP 640

Query: 643  QGISVVDQSLRLVAWNHRYLELFEYP------DGLVYIGRPIADIIRYNAERGLCGPGDP 696
             G+  + +   ++ WN    EL            L  I  P  D+++            P
Sbjct: 641  MGVCSLAKDQEILMWNKAMEELTGIAAQRVVGSRLSTIADPWKDLLQGFINL-------P 693

Query: 697  DTHVAK-------RLYWMRQGRAHTSERLFPNGRVVELIGNPMPGGGFVMSFSDITAYRE 749
            D H+ K       +  W+   +A   E L P        GN     G V+   D+T    
Sbjct: 694  DEHLHKQHLALDGQTRWLNLHKAAIDEPLAP--------GN----SGLVLLVEDLT---- 737

Query: 750  AERALKDANEGLEQRVSERTQELSQLNQALIEAKSTAEAANQSKTRFLAAVSHDLMQPLN 809
                                 E   L   L+ ++  A     S  R  A V+H++  P+ 
Sbjct: 738  ---------------------ETQMLEDKLVHSERLA-----SIGRLAAGVAHEIGNPIT 771

Query: 810  AARLFSAALSHQQSALPREAQELVQHLDSSLRSAEDLITDLLDISRLESGRVTPDRNPFP 869
                 +  L  ++     E +E+   +    +    ++  L+  +   +G    +  P  
Sbjct: 772  GIACLAQNLREEREE-DGELKEISGQILEQTKRVSRIVQSLMSFA--HAGSHQHNDEPVC 828

Query: 870  LATLF-DTLGTEFTVLAREQGVNFRVHGSKL-----RVDSDIRLLRRVLQNFLTNAFRYA 923
            LA +  D +G     L R    NF V    L      V+ D + L +VL N L+NA   +
Sbjct: 829  LAEVAQDAIG--LLALNRR---NFEVQFYNLCDPEHWVEGDPQRLAQVLINLLSNARDAS 883

Query: 924  KGRVVLGVRRQGA--SLRLEVWDRGPGIPQDKLKVIFEEFKRLDSHQTRAEKGLGLGLAI 981
                 + V+ +    ++ L V D G GIP   +  +FE F           +G GLGLA+
Sbjct: 884  PPGSAVRVKSEAGEHTVDLIVEDEGSGIPSSIMDRLFEPFFTTKD----PGEGTGLGLAL 939

Query: 982  ADGLCH------VLEHPLEVRSWPGKGSVFSVTVP 1010
               +         ++ P +V+S   +G+   VT+P
Sbjct: 940  VYSIVEEHYGQITIDSPADVQS--QRGTRIRVTLP 972