Pairwise Alignments

Query, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

Subject, 924 a.a., Adaptive-response sensory-kinase SasA from Xanthobacter sp. DMC5

 Score =  479 bits (1234), Expect = e-139
 Identities = 292/680 (42%), Positives = 412/680 (60%), Gaps = 37/680 (5%)

Query: 3   LSGGLIAAVALVYMAILFAIAFYGDRN-RDSMSPRLRPWVYSLSLAVYCTSWTFFGAVGQ 61
           LS  L+  VA +Y+A LFAIA + DR  R+  S     WVY LSLAVYCT+WT+FG+VG+
Sbjct: 5   LSPALVIGVAALYLAALFAIAAFADRRAREGRSLIGNAWVYGLSLAVYCTAWTYFGSVGR 64

Query: 62  -STEQLWAFLPIYLGPILLMLFAPHVIQKMIMISKQENITSIADFIAARYGKSQVLAVVV 120
            +T  +W FLPIYLGP L+ML A  V++KMI I+    ITSIADFIA+RYGKS ++A VV
Sbjct: 65  AATTGVW-FLPIYLGPTLVMLVAWVVVRKMIRIAHTYRITSIADFIASRYGKSPLVAAVV 123

Query: 121 TLICLVGVLPYIALQLKGIVLGVNVLSGINVEAAG-TGTRDTALIVSIVLALFTILFGTR 179
           TLI +VG++PYIALQLK +  G  VL+    +AA  +  +D  L+V++ LALFTILFGTR
Sbjct: 124 TLITVVGIVPYIALQLKAVSAGYTVLTATGAQAAAPSWWQDGTLLVALALALFTILFGTR 183

Query: 180 NLDVTEHHRGMVLAIAFESLVKLLAFLAVGAFVTFGLYNGFGDLFNRAHDAPELADF--- 236
           +LD  E H GMV A+A ESLVKL+AFLAVGAFVT+GL+ GF D++ RA   P +      
Sbjct: 184 HLDSAERHEGMVAAVAAESLVKLVAFLAVGAFVTYGLFGGFADVWARASALPGVKGLLTL 243

Query: 237 -WSENVNWAAMLVQTTVAMMAIVCLPRQFHVSVVENIEPRDFRLARWVFPLYLVLAAVFV 295
             + N  WA     T ++ ++++ LPRQF + VVE ++ R  + A WVFP YL+   +FV
Sbjct: 244 SGAGNFAWAQWFSLTLLSGLSVLLLPRQFQMMVVECVDERHLKRAAWVFPAYLLAINIFV 303

Query: 296 VPIALAGQMLLPAGVTPDSFVISLPLAELHPWLALLAFIGGASAATGMVIVASVALSTMV 355
           +P+AL G +LL  G  P++FV++LPLA     LAL+A++GG SAATGM+IV ++A+STMV
Sbjct: 304 LPLALGGLVLLGKGADPETFVLTLPLAHGAGGLALIAYVGGLSAATGMLIVETIAVSTMV 363

Query: 356 SNDMLLPWLLRRQEAERPFEAFRHWMLSVRRITIVAILLLAYVSYRLLGSTASLATIGQI 415
            ND+++P LLR +            +L++RR  I+ +LLL Y+ + + G   +L +IG I
Sbjct: 364 CNDLVMPALLRLKLIRADGGDLTRLLLNIRRAAILGVLLLGYLYFVVAGEAYALVSIGLI 423

Query: 416 AFAAITQLAPAMVGALYWKQANRRGVFAGLTAGAAIWFYTLILPLL---GWPLDMFPGLS 472
           +FAA+ Q APA++G +YW+ A R G   GL  G A+W YTL+LP +   GW        +
Sbjct: 424 SFAAVAQFAPALLGGMYWRGATRLGALGGLLGGFAVWAYTLMLPSVAKSGW-----MDAA 478

Query: 473 WMYNGGLG---------FGLSG---LTLGVTLSLIGNATLFFWVSILTQTHVAEHWQASR 520
           ++ +G  G         FGLSG   L+  +  SL  N  L+  +S+       E  QA  
Sbjct: 479 FLTHGPFGIAALAPERLFGLSGLDNLSHALFWSLFVNGVLYVGLSLWRAPSGREASQALL 538

Query: 521 FI-----GQEITSPTGARRLLAVRVEDLLTLASRFVGAERAEQSFQRFARRHGQDFTPKL 575
           F+     G+    P   R        DL  LA R +GA+ A Q F+  AR  G      L
Sbjct: 539 FVDVFARGRSAADPVFWRG--RAHRADLEALARRLLGADTARQIFEDHARDSGTGDVADL 596

Query: 576 QADGQWIAHTERLLAGVLGASSTRAVVKAALEGRDMQVDDVVRIVGEASEVLQFNRALLQ 635
            AD + +   ER +AG +GA+S R +V A  +   +   DV+ I+ EAS++  + RAL +
Sbjct: 597 TADARLVDIVERRIAGAVGAASARVLVAAVADEEPLNAGDVMDILNEASQLRVYARALEE 656

Query: 636 --GAIENITQGISVVDQSLR 653
              ++E  +  +S  +  LR
Sbjct: 657 KSRSLEIASAELSAANAQLR 676



 Score = 76.6 bits (187), Expect = 8e-18
 Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 17/286 (5%)

Query: 731  PMPGGGFVMSFSDITAYREAERALKDANEGLEQRVSERTQELSQLNQALIEAKSTAEAAN 790
            P+  G  +   ++ +  R   RAL++ +  LE   +E +   +QL              +
Sbjct: 631  PLNAGDVMDILNEASQLRVYARALEEKSRSLEIASAELSAANAQLR-----------TLD 679

Query: 791  QSKTRFLAAVSHDLMQPLNAARLFSAALSHQQSALPREAQELVQHLDSSLRSAEDLITDL 850
            + K  F+++V+H+L  PL A R  S  +         + Q+ ++ +         L+  +
Sbjct: 680  ELKDDFMSSVTHELRTPLTAIRALSELMLDTPDMEAEQRQDFLRIIVGESERLGRLVNQV 739

Query: 851  LDISRLESGRVTPDRNPFPLATLFDTLGTEFTVLAREQG--VNFRVHGSKLRVDSDIRLL 908
            LD++++ESG          L  L          LAR +G  +      S   V +D   L
Sbjct: 740  LDMAKIESGHAEWHSTDVDLKALVADAVKATAELARTKGAEIVLTAPASVPSVKADPDRL 799

Query: 909  RRVLQNFLTNAFRYAK---GRVVLGVRRQGASLRLEVWDRGPGIPQDKLKVIFEEFKRLD 965
             +V+ N ++NA ++     GR+ + +      L ++V D GPG+P      IFE+F++  
Sbjct: 800  TQVMLNLISNAAKFVPAQGGRIDVRLLADADGLEVQVEDNGPGVPPADRDTIFEKFRQGG 859

Query: 966  SHQTRAEKGLGLGLAIADGLCHVLEHPLEVRSWPGKGSVFSVTVPI 1011
                R   G GLGL I+  +       + +    GKG+ F+  +P+
Sbjct: 860  DALNR-PPGTGLGLPISRRIVDHFGGKIWLDQKAGKGACFAFRLPL 904