Pairwise Alignments

Query, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

Subject, 1159 a.a., putative Sodium-solute symporter/sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score = 1759 bits (4557), Expect = 0.0
 Identities = 883/1160 (76%), Positives = 999/1160 (86%), Gaps = 9/1160 (0%)

Query: 1    MKLSGGLIAAVALVYMAILFAIAFYGDRNRDSMSPRLRPWVYSLSLAVYCTSWTFFGAVG 60
            M LS GLIA VAL YMAI+FAIAFYGDR    + P+LR WVYSLSLAVYCTSWTFFGAVG
Sbjct: 1    MSLSSGLIAVVALAYMAIMFAIAFYGDRRSTPLPPKLRAWVYSLSLAVYCTSWTFFGAVG 60

Query: 61   QSTEQLWAFLPIYLGPILLMLFAPHVIQKMIMISKQENITSIADFIAARYGKSQVLAVVV 120
            Q+ EQLWAFLPIYLGP+LL++FAP V+QKM++ISKQ+NITSIADFIAARYGKSQ LAVVV
Sbjct: 61   QAAEQLWAFLPIYLGPVLLLIFAPWVLQKMVLISKQQNITSIADFIAARYGKSQTLAVVV 120

Query: 121  TLICLVGVLPYIALQLKGIVLGVNVLSGINVEAAGTGTRDTALIVSIVLALFTILFGTRN 180
             LICLVGVLPYIALQLKGIVLGVN+L G N +A GT  +DTAL++S+VLALF I+FGTR+
Sbjct: 121  ALICLVGVLPYIALQLKGIVLGVNLLIGANADATGTRVQDTALVISLVLALFAIVFGTRS 180

Query: 181  LDVTEHHRGMVLAIAFESLVKLLAFLAVGAFVTFGLYNGFGDLFNRAHDAPELADFWSEN 240
            LDVTEHHRGMVLAIAFESL+KLLAFLAVG F+ F L++GF DLF++A  +  L D+W E 
Sbjct: 181  LDVTEHHRGMVLAIAFESLIKLLAFLAVGIFIVFNLFDGFDDLFSQARQSIHLQDYWKET 240

Query: 241  VNWAAMLVQTTVAMMAIVCLPRQFHVSVVENIEPRDFRLARWVFPLYLVLAAVFVVPIAL 300
            +NW +M+VQT VAMMAI+CLPRQFHV+VVENIEP+D RLARWVFP+YL LAA+FVVPIAL
Sbjct: 241  INWPSMVVQTAVAMMAIICLPRQFHVTVVENIEPQDLRLARWVFPMYLALAALFVVPIAL 300

Query: 301  AGQMLLPAGVTPDSFVISLPLAELHPWLALLAFIGGASAATGMVIVASVALSTMVSNDML 360
            AGQMLLP  V  DSFVISLPLAE HP LALLAFIGGASAATGMVIV +VALSTMVSNDML
Sbjct: 301  AGQMLLPGTVISDSFVISLPLAEAHPSLALLAFIGGASAATGMVIVEAVALSTMVSNDML 360

Query: 361  LPWLLRRQEAERPFEAFRHWMLSVRRITIVAILLLAYVSYRLLGSTASLATIGQIAFAAI 420
            LPWLLRR  AERPFEAFRHWMLSVRR+TIV ILLLAYVSYRLLGSTASLATIGQIAFAA+
Sbjct: 361  LPWLLRRNNAERPFEAFRHWMLSVRRVTIVVILLLAYVSYRLLGSTASLATIGQIAFAAV 420

Query: 421  TQLAPAMVGALYWKQANRRGVFAGLTAGAAIWFYTLILPL----LGWPLDMFPGLSWMYN 476
            TQL PAM+GALYWKQANRRGVFAGL AG  +WFYTL+LP+    LGW L +FPGL+W++ 
Sbjct: 421  TQLTPAMLGALYWKQANRRGVFAGLAAGIFLWFYTLVLPIAAHSLGWSLQLFPGLAWLHG 480

Query: 477  GGLGFGLSGLTLGVTLSLIGNATLFFWVSILTQTHVAEHWQASRFIGQEITSPTGARRLL 536
              L   +S LT GV LSL GN TLF WVS+L++T V+EHWQA RFIGQ+ ++   ++ LL
Sbjct: 481  NPLNLPISPLTQGVVLSLAGNFTLFAWVSVLSRTRVSEHWQAGRFIGQQTSARPSSKPLL 540

Query: 537  AVRVEDLLTLASRFVGAERAEQSFQRFARRHGQDFTPKLQADGQWIAHTERLLAGVLGAS 596
            AV+++DLLTLASRFVG ERA QSF RFA R G+ F P   ADG WI HTERLLAGVLG S
Sbjct: 541  AVQIDDLLTLASRFVGEERARQSFIRFAYRQGKGFNPNQNADGDWIEHTERLLAGVLGTS 600

Query: 597  STRAVVKAALEGRDMQVDDVVRIVGEASEVLQFNRALLQGAIENITQGISVVDQSLRLVA 656
            STRAVVKAA+EGRDMQ++DVVRI  EASEVLQFNRALLQGAIENI QGISVVDQ+L LVA
Sbjct: 601  STRAVVKAAIEGRDMQLEDVVRIADEASEVLQFNRALLQGAIENINQGISVVDQNLHLVA 660

Query: 657  WNHRYLELFEYPDGLVYIGRPIADIIRYNAERGLCGPGDPDTHVAKRLYWMRQGRAHTSE 716
            WN RYLELF YPDGL+ +GRPIADIIRYNAERGLCGPG+   HVA+RL+WMRQGRAH+SE
Sbjct: 661  WNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCGPGEAQVHVARRLHWMRQGRAHSSE 720

Query: 717  RLFPNGRVVELIGNPMPGGGFVMSFSDITAYREAERALKDANEGLEQRVSERTQELSQLN 776
            RLFPNGRV+ELIGNPMPGGGFVMSF+DIT +REAE+AL+DANE LEQRV+ERT ELSQLN
Sbjct: 721  RLFPNGRVIELIGNPMPGGGFVMSFTDITPFREAEQALRDANERLEQRVAERTHELSQLN 780

Query: 777  QALIEAKSTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQQSALPREAQELVQHL 836
            QAL EAKS AEA + SKTRFLAAVSHDLMQPLNAARLFSAALS Q   +  EA++LVQH+
Sbjct: 781  QALSEAKSQAEAVSNSKTRFLAAVSHDLMQPLNAARLFSAALSQQAEGMNEEARQLVQHM 840

Query: 837  DSSLRSAEDLITDLLDISRLESGRVTPDRNPFPLATLFDTLGTEFTVLAREQGVNFRVHG 896
            DSSLRSAE+LI+DLLDISRLE+G++TPD  PF L  LFDTLG EF +LA E+G+ FR+ G
Sbjct: 841  DSSLRSAEELISDLLDISRLENGKITPDAKPFALNELFDTLGAEFKLLAAEKGLEFRLRG 900

Query: 897  SKLRVDSDIRLLRRVLQNFLTNAFRYAKGRVVLGVRRQGASLRLEVWDRGPGIPQDKLKV 956
            S+LRVDSD++LLRRVLQNFLTNA RY K  ++LG RRQG  L LEVWDRGPGI  DKL+V
Sbjct: 901  SRLRVDSDMKLLRRVLQNFLTNALRYGKSPILLGARRQGERLWLEVWDRGPGIADDKLQV 960

Query: 957  IFEEFKRLDSHQTRAEKGLGLGLAIADGLCHVLEHPLEVRSWPGKGSVFSVTVPIAR--A 1014
            IF+EFKRLDSHQTRAEKGLGLGLAIADGLC VL HPLEVRSWPGKG+VF V+VPIAR  A
Sbjct: 961  IFQEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHPLEVRSWPGKGTVFRVSVPIARQAA 1020

Query: 1015 LSQPRPVVKRGEPQHSALTGTQVLCIDNEDSILVGMSSLLTRWGCQVWTASNRDECEALL 1074
             +   PV ++G      L G QVLC+DNEDSIL+GM+SLL+RWGCQVWTA N+ ECEALL
Sbjct: 1021 AAPSTPVEQQG---GQPLAGLQVLCVDNEDSILIGMNSLLSRWGCQVWTARNQAECEALL 1077

Query: 1075 AEDIRPQLVLVDYHLDEGQTGTELMAWLRTRLGEPVPGVVISADGRPELIAAIHASGLDF 1134
            A+ +RP L LVDYHLD+G+TGT LM WLR RLGEPVPGVVISADG  E IA +HASGLD+
Sbjct: 1078 AKGMRPHLALVDYHLDDGETGTGLMGWLRARLGEPVPGVVISADGSKETIALVHASGLDY 1137

Query: 1135 LAKPVKPAALRALMSRHLTL 1154
            LAKPVKPAALRAL++RHL+L
Sbjct: 1138 LAKPVKPAALRALLNRHLSL 1157