Pairwise Alignments

Query, 289 a.a., nitrate ABC transporter, permease protein from Pseudomonas stutzeri RCH2

Subject, 256 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  112 bits (279), Expect = 1e-29
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 16/250 (6%)

Query: 24  AALARRSGRYAVQQLVPPLVILLVLGVIWEMLCSGAD--AALPPPSQVVAETWELIIDPF 81
           +A  RR+ R++       L  L +L   W +  +G D    LP P++V     E+I    
Sbjct: 3   SAAIRRAARFS-----SALSGLGLLVAFWALAAAGLDNPVLLPSPAEVAGVLGEVIGSGA 57

Query: 82  YDNGGNDVGLAWQLLASLQRVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVP 141
           +     D+G      ASL+RV  GY+LA    V L +++       + L P+  +LR +P
Sbjct: 58  FHR---DLG------ASLRRVLGGYVLASGLAVPLALVMAAWGPLRQSLLPVVSLLRPIP 108

Query: 142 PLAWLPLSLAGFQDSHPSALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEY 201
           P+AW+PL++  F      + F+  I A +PI +N   G   +   Y + A+ L       
Sbjct: 109 PIAWIPLAILWFGLGDAPSFFITAIAAFFPIFLNAFAGGLAVGGRYLDAARCLGATRLAL 168

Query: 202 FKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGGVGIGFFIWDAWNASRISDIILAL 261
              + LPAA P I TGLRIG+G SW+A++ AE++    G+G+ I       + + +++ +
Sbjct: 169 LLEVRLPAALPMIATGLRIGLGQSWMAVVTAELIAAQSGLGYMIQANRLTLQTAHVLVGM 228

Query: 262 VYIGVVGFVL 271
           V IG +G ++
Sbjct: 229 VTIGTLGALM 238