Pairwise Alignments

Query, 234 a.a., DnaA regulatory inactivator Hda from Pseudomonas stutzeri RCH2

Subject, 235 a.a., regulator of DnaA that prevents premature reinitiation of DNA replication from Pseudomonas putida KT2440

 Score =  367 bits (941), Expect = e-106
 Identities = 182/232 (78%), Positives = 208/232 (89%)

Query: 3   PIQLPLGVRLRDDATFANFYPGANAAALGYVERLCSPAAGWSDELIYLWGQAGVGRSHLL 62
           PIQLPLGVRLRDDATF N+YPGANAAALGYVERLC   AGW++ LIYLWG+ GVGRSHLL
Sbjct: 4   PIQLPLGVRLRDDATFINYYPGANAAALGYVERLCEADAGWTESLIYLWGKQGVGRSHLL 63

Query: 63  QAACLRVEERGEQAVYLPLAEVVEYGPALLDNLEQCELVCLDDLDAVAGDAVWEEALFHL 122
           QAA  R ++RGE AVYLPLA++++ G  LLD L Q ELVC+DDL  +AG A WEEA+FHL
Sbjct: 64  QAATHRFQQRGEPAVYLPLAQLLDRGVELLDYLAQYELVCIDDLHVIAGKADWEEAMFHL 123

Query: 123 FNRLRDAGRRLLLAANGSPRELPVKLPDLKSRLSLALVFQLQQLSDEDKLRALQLRASRR 182
           FNRLRD+GRRLLLAA+ SPRELP+KLPDLKSRL+LALVFQ++ LSDEDKLRALQLRASRR
Sbjct: 124 FNRLRDSGRRLLLAASASPRELPIKLPDLKSRLTLALVFQMRGLSDEDKLRALQLRASRR 183

Query: 183 GLNLPDDVGRFILTRGSRSMNALFELLDQLDQASLQAQRKLTIPFLKETLGW 234
           GL+L D+VG FILTRG+RSM+ALF+LL++LDQASLQAQRKLTIPFLKETLGW
Sbjct: 184 GLHLTDEVGHFILTRGARSMSALFDLLERLDQASLQAQRKLTIPFLKETLGW 235