Pairwise Alignments

Query, 234 a.a., DnaA regulatory inactivator Hda from Pseudomonas stutzeri RCH2

Subject, 467 a.a., chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator from Escherichia coli BL21

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 11/227 (4%)

Query: 17  TFANFYPGANAAALGYVERLCSPAAGWSDELIYLWGQAGVGRSHLLQAACLRVEERGEQA 76
           TF NF  G +        R  +   G +   ++L+G  G+G++HLL A    +  R   A
Sbjct: 137 TFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNA 196

Query: 77  --VYLPLAEVVEYGPALLDN---------LEQCELVCLDDLDAVAGDAVWEEALFHLFNR 125
             VY+     V+     L N             + + +DD+   A     +E  FH FN 
Sbjct: 197 KVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNA 256

Query: 126 LRDAGRRLLLAANGSPRELPVKLPDLKSRLSLALVFQLQQLSDEDKLRALQLRASRRGLN 185
           L +  ++++L ++  P+E+      LKSR    L   ++    E ++  L  +A    + 
Sbjct: 257 LLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIR 316

Query: 186 LPDDVGRFILTRGSRSMNALFELLDQLDQASLQAQRKLTIPFLKETL 232
           LP +V  FI  R   ++  L   L+++   +    R +TI F++E L
Sbjct: 317 LPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREAL 363