Pairwise Alignments

Query, 255 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 262 a.a., putative Periplasmic binding protein from Pseudomonas putida KT2440

 Score = 56.2 bits (134), Expect = 7e-13
 Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 23/251 (9%)

Query: 5   WTAMLLALA-LPVGYSHAEQVRFVTEDFPPFTFAATTAPIDTPAGPFVDVIGAVCAQLRI 63
           W  +L+ L+ L +G    E++R VT+D+ P+ F         P G   +V   V A+L +
Sbjct: 9   WILLLVCLSPLALG----ERLRLVTDDWAPYVFQHN----GQPRGIDYEVASQVFARLGV 60

Query: 64  DCPIQLLPWRRALALAEGGEVDGIFTVIRSPERE-RAFHLTRMLVTSRYGVYARSASRFV 122
           +   Q LPW+R LA+AE G  DGI  + ++  R+    +    +    + ++   + R  
Sbjct: 61  EVEWQFLPWKRCLAMAEQGLADGILDIFQTDARQPYMVYGAEPMSEVEFVLFQSRSRRHA 120

Query: 123 FHRPEDLAGRTVAVYGPSGTSFVLGQHLTKVADVELILESDNRRLMRMLQAGRFGEQGVA 182
               +DLAG TV     +   +  G+  T+    +             L  GR     + 
Sbjct: 121 VTHLDDLAGLTVG----TSPGYAYGKGFTEAPHFKREAAPTQEANFGKLILGRI---DLV 173

Query: 183 VVNQDVAWHLIEQERLADIHEAGELQAV----SYAIGLSRAAVSEAEFKRFNQALESLIA 238
           + ++ V  +L+ Q  L    +  EL  V    +  +GL R    EA    F + L+    
Sbjct: 174 ITDRRVGHYLLRQLGLQ--QQVEELPLVISRQAQYLGLVRKPGREALAVAFAEELQRFKQ 231

Query: 239 DGTVSRILRRY 249
           +   + I  RY
Sbjct: 232 EPAYAAISNRY 242