Pairwise Alignments

Query, 255 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 245 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score = 50.1 bits (118), Expect = 4e-11
 Identities = 56/248 (22%), Positives = 98/248 (39%), Gaps = 19/248 (7%)

Query: 9   LLALALPVGYSHAEQVRFVTEDFPPFTFAATTAPIDTPAGPFVDVIGAVCAQLRIDCPIQ 68
           LLA  L        ++R V + +PPFT A          G    ++    A+       +
Sbjct: 10  LLATMLATPAPGHAKLRLVADSWPPFTDAKMPG-----GGLATSIVTTALARAGYASGYE 64

Query: 69  LLPWRRALALAEGGEVDGIFTVIRSPERERAFHLTRMLVTSRYGVYARSASRFVFHRPED 128
            +PW RAL     G  D +     +  R      +   +++R  +  R    F + R  D
Sbjct: 65  EVPWARALLGVGEGRYDVLINAWYNDSRANIGQFSSAYLSNRIRLLQRKGEAFSYKRLSD 124

Query: 129 LAGRTVAVYGPSGTSFVLGQHLTKVADVELILESDNRRLMRMLQAGRFGEQGVAVVNQDV 188
           L   ++AV       +           +  +   +    +RML AGR     +AV ++ V
Sbjct: 125 LYAYSIAVV----RDYAYSPEFDGDPRLHKVPVRNFSSAVRMLAAGRVS---LAVEDEYV 177

Query: 189 AWHLIEQERLADIHEAGELQAVSYAIGLSRAAVS------EAEFKRFNQALESLIADGTV 242
           A + +++E   D+ +   L             VS      +   +RF QA+ ++ ADG+ 
Sbjct: 178 ARYNLQREP-QDVRDGVMLVDPPLGENTLHILVSLKHPEHDRIVERFEQAIAAMKADGSY 236

Query: 243 SRILRRYG 250
           +R+LR+YG
Sbjct: 237 ARLLRQYG 244