Pairwise Alignments

Query, 685 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

Subject, 666 a.a., choline transporter from Pseudomonas simiae WCS417

 Score =  534 bits (1375), Expect = e-156
 Identities = 269/650 (41%), Positives = 407/650 (62%), Gaps = 9/650 (1%)

Query: 15  PVFIPAVIVTLLLVIGTISNPELAGEVFSSTLAFITTNFGWFYMLSVAFFLVFIVGIAMT 74
           PVF  A    LL  I  I+ P+ AG    +   +     GW+YML++  +LVF+V  A++
Sbjct: 17  PVFYFAATFILLFGITVIAIPQQAGAWLLAAQNWAANTVGWYYMLAMTLYLVFVVVTALS 76

Query: 75  PWGSIKLGPDHAEPQYSFPAWFAMLFSAGYGIALLFFGVAEPVLHYASPPAGAGETVDAA 134
            +G IKLG DH EP++S+ +W  MLF+AG  I L FF V+EP+ H   PP GA    DAA
Sbjct: 77  GYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHLVQPPQGAPMNADAA 136

Query: 135 KQAMQIAFFHWGFHIWAIYGLTGLVLAYFSFRHGLPLSMRSALYPIIGERIHGPIGHVVD 194
           +QAMQI F HWG H W ++   G+ LAYF++RH LPL++RSALYP+IG+RI+GPIG+ VD
Sbjct: 137 RQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGYAVD 196

Query: 195 IFAILGTLFGIATTLGLSVTQINAGINYLWPSIPISINVQIIAIAIITGLAICSVVAGLD 254
            F I+ T+FG+   +G  V  +N+G++YL+  I  +  +Q+  I ++ G AI   VAG+D
Sbjct: 197 GFGIIATVFGLGADMGFGVLHLNSGLDYLF-GIAHTQWIQVGLITLMMGAAIIVAVAGVD 255

Query: 255 KGVKNLSLLNMVLAIGLMLFVFLVGPSIFILETFLQNTGSYLNNIIERTFNLQAYSR-SD 313
           KGV+ +S +NM+LA  L+LFV   GP+  +L T +QN G YL  +  ++F++ AY + SD
Sbjct: 256 KGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGALPTKSFDVYAYDKPSD 315

Query: 314 WIGNWTLFIFGWTIAWSPFVGLFIAKISRGRTIRQFVFGVMFVPTIFTFLWFSVFGDTAL 373
           W+G WT+F + W IAWSPFVGLFIA+ISRGRTIR+FVFGV+ +P  FT  W S+FG++A+
Sbjct: 316 WLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIFGNSAI 375

Query: 374 HMIMVEGYTSLISDVQADNAIALFKLFELLPLTSIASFLAVVLIITFFVTSSDSGSLVID 433
             ++  G  +L      D +++L+ L E  P +     + V +   FFVTS+DSG++V+ 
Sbjct: 376 DQVLNHGLVALGQSAIDDPSMSLYLLLETYPWSKTVIAVTVFISFVFFVTSADSGTVVLS 435

Query: 434 SLAAGGA---LHTPVWQRVFWASIEGIVASTLLLAGGLSALQTMTIASALPFAIIMMIAA 490
           +L++ G       P W RVFW ++  +V S LL AG + +L++  + ++LPF++I+++  
Sbjct: 436 TLSSKGGNADEDGPKWLRVFWGAMTALVTSALLFAGSIDSLKSAVVLTSLPFSMILLLMM 495

Query: 491 LGMWRALVIEGHHETSLQSHMQGSRLASNAGPGLWKKRLAGMVSFPSREEVDGFMNTTVL 550
            G+ +A  +E   + + Q H      A+  G G W++RL+  V FPSR+EV  F+ +TV 
Sbjct: 496 WGLHKAFYLESQKQIA-QLHSLAPVSAARKGRGGWRQRLSQAVHFPSRDEVYRFLESTVR 554

Query: 551 KAMRRVQRELSGQEWAAEVHTDEAHSRLYLEVIKDDQVDFIYEIRAVGYAMPAFA---LT 607
            A+  V      +        D ++  + LE+   ++  F+Y+++  GY  P+FA   + 
Sbjct: 555 PAIEEVTAVFVEKGLNVVTQPDPSNDSVSLEIGHGEERPFVYQVQMRGYFTPSFARGGMG 614

Query: 608 EDPETDEQYYRAEVFLRRGGQHYDVYGYDQADIISDILDQFEKYLHFLHI 657
                + +YYRAEV L  G Q YD+ GY +  II+DILDQ+E++L FLH+
Sbjct: 615 SKEINNRRYYRAEVHLAEGSQDYDLVGYTKEQIINDILDQYERHLQFLHL 664