Pairwise Alignments

Query, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

 Score =  206 bits (524), Expect = 4e-58
 Identities = 114/254 (44%), Positives = 159/254 (62%), Gaps = 4/254 (1%)

Query: 1   MKSYKKILLTAAASLIIGTQAFA-AEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALC 59
           MK     + TA   L+      A AE LRI +EGAYPPFN +D++ ++ GFD+DI++ALC
Sbjct: 1   MKKLTSTITTATLWLLCTVAGAAHAETLRIASEGAYPPFNYVDSNNRLHGFDIDIANALC 60

Query: 60  AKMKVECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPK 119
            +MKV C  VT DW+G+IPAL A K+D + ASM+VTEERK  + FT+ YY   L      
Sbjct: 61  ERMKVNCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSVAVAH 120

Query: 120 NVEFQTDEGYLKGKVIGAQRATIAGTWLEDN-LDRVVDIKLYDTQENAYLDLASGRVDGI 178
           +      +   KG  +GAQ  +    + E++  +    +KLY +Q+ A  DLA+GR+DG+
Sbjct: 121 DSGISDAQTNFKGLTVGAQSYSTQAIYAEEHYAEAGATVKLYPSQDEAASDLAAGRLDGV 180

Query: 179 LADTFVQWEWLKSDAGKN-FEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGT 237
           +AD +    W+ + AGK+   F G+    +   AIAVR+G+ ELRERLNKAL EI+ADGT
Sbjct: 181 IADKYPLLAWV-AGAGKDCCTFLGDIDGTNTDAAIAVRQGDVELRERLNKALDEIVADGT 239

Query: 238 YKQINDKYFPFSIY 251
           YK I+ +YF F IY
Sbjct: 240 YKNISRRYFAFDIY 253