Pairwise Alignments

Query, 567 a.a., His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. from Pseudomonas stutzeri RCH2

Subject, 796 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  260 bits (664), Expect = 2e-73
 Identities = 160/461 (34%), Positives = 250/461 (54%), Gaps = 36/461 (7%)

Query: 117 RPVQSITLTSAVKAALRGRHRQYEVRA-------LLEARERASNQLEALVVERTSELEKA 169
           RP  S  L   +  +  G H +  ++        L  +       +  LV+      E+ 
Sbjct: 349 RPAASEQLGKVIAGSTPGTHLEVRLKGRRNLIAQLFVSPSHEDGDISGLVIHFIDATEQR 408

Query: 170 NQELRTQMAERAQIEETLRQAQKIEAIGQLTGGIAHDFNNLLMVISGGLDMLDRR---AD 226
           N E++              Q+QK++A+GQL GG+AHDFNNLL  + G  D+L +R    D
Sbjct: 409 NLEMQ------------FAQSQKMQAMGQLAGGVAHDFNNLLTAMIGFCDLLLQRHGAGD 456

Query: 227 PARRERLMDGMRQAAQRGTALTRQLLAFSRRQSLEPESVDLVLRIGRMRELLDRSLSGDV 286
           P+  + +   ++Q A R  +L RQLLAFSRRQ+L+P  +++   +  +  LL R L   +
Sbjct: 457 PSFADIMQ--VKQNANRAASLVRQLLAFSRRQALQPRLLNVTDALAELSNLLRRLLGETI 514

Query: 287 HVEVQFEPDLWPVEVDPGELELVVLNLAVNARDAMPDGGSILIEASNAPGEAV------L 340
            + +     L  V VDPG+ + V++NLAVNARDAMP GG++ I  +    +        L
Sbjct: 515 ELRMIHGRALGLVRVDPGQFDQVIINLAVNARDAMPGGGALTIRTNAVHVDQPIQRGPEL 574

Query: 341 GITGDFVRLTVTDSGTGIPEEVRTRVFDPFFTTKEIGKGSGLGLAQVYGFARQSGGSVWI 400
              GD+V++ V D+GTGI +E   R+F+PFF+TKE+G G+GLGL+ VYG  RQ+ G +++
Sbjct: 575 MPAGDYVQIEVADTGTGIGKENLARIFEPFFSTKEVGAGTGLGLSTVYGIVRQTDGFIFV 634

Query: 401 ESECDRGTSVIMLLPRSARVPEQPDGERPAEDDSSDA---SAGTVLLVDDDEEVAALVGE 457
           ESE  +G +  + LPR    P       P   +++ A    +GT+LLV+D++ V      
Sbjct: 635 ESEPGQGATFSIYLPRIDADPAAETKRAPLPSEAAGADLTGSGTILLVEDEDAVRLFGAR 694

Query: 458 MLEHLGYRVTHAASATDALGALQDGCQVDIVFSDVMMPGGMNGVELAREIRTRALGVPVL 517
            L + GY V  A S   A+  L  G  + ++ SDV+MP GM+GV LAR +R     + V+
Sbjct: 695 ALRNKGYTVIEARSGEQAMEVLNGGEPIQVLISDVVMP-GMDGVTLARFVRMERPAIKVI 753

Query: 518 LTSGYAEAAQQSA--AAEGVHVLAKPYRLEELATSLREAIE 556
           L SGY+E   +       G+H L KP+ L +LA ++++ ++
Sbjct: 754 LISGYSEDVARDGIDPDAGIHFLPKPFSLRQLAGAVKQVMD 794