Pairwise Alignments

Query, 231 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

Subject, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

 Score =  161 bits (408), Expect = 9e-45
 Identities = 92/219 (42%), Positives = 137/219 (62%), Gaps = 1/219 (0%)

Query: 7   GFGPALIAGTWMTIQLALASLALGLVLGLLGALAKTSPYSALRWLGGTYSTIVRGVPELL 66
           G+G AL+AG  +T+ LALA L +GL LGL+ ALA  S     R    T+ST+ RG+PELL
Sbjct: 14  GWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLPELL 73

Query: 67  WVLLIYFGTISMIRGIGELFGIEN-LALSPFAAGTIALGLCFGAYATEVFRGALLAIPKG 125
            +L+IY+G     + I    G +    ++ F A  IA  L F A+++E++  A   +PKG
Sbjct: 74  TLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLAAFKTLPKG 133

Query: 126 HREAGLALGLGKRRIFTRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLEEIMRRSQI 185
             EA  ALGL KR  F +++LPQ+ R+ALPGL N ++ L+KDT+LVS I L ++MR++ +
Sbjct: 134 QLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQTNL 193

Query: 186 AVTASKEPFTFFLVAAFIYLCLTIVAMVGMHFLEKRAGR 224
           AV+ +KEP  F+ VA   YL    ++     ++E+R+ R
Sbjct: 194 AVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNR 232