Pairwise Alignments

Query, 325 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

Subject, 338 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 56.6 bits (135), Expect = 8e-13
 Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 18/269 (6%)

Query: 1   MFKKTLLASALLALFSQSALAADKVRWLNDWLPAGDKAAIY-----LGVEQGLFAAEGID 55
           M K  + A AL      +A  A K       L  G K  +Y     +   +G F  EG+D
Sbjct: 3   MLKLAVAAIALACAVPAAAQPAAKAEKPKLTLGVGGKPLLYYLPLTIAERKGFFKDEGLD 62

Query: 56  VEIASARGGSDVVTKLATNSADFGSAGLASLLQAKAQGEVPVVAVAPIYNKQPDAFFTTE 115
           V I    GG+  +  L   S D  +      ++ +A+G+  +V+V  +           +
Sbjct: 63  VAINDFGGGAKSLQALIGGSIDVVTGAYEHTIRMQAKGQ-DIVSVIELGRFPGIVLVARK 121

Query: 116 GSGIESFKDIVG-KTVATPTFSASNVVWPLLLERNGIDPASVKLLKLDPGALA-PMLATG 173
              I+S KD+ G K   T   S++N     L+ ++G+ P     + +  GA A   +  G
Sbjct: 122 DRPIKSVKDLKGAKIGVTAPGSSTNFFVNFLMAKDGLKPDDASYVGVGGGASAVAQMKRG 181

Query: 174 KVDATINWLTVAPGFVRALGEADKTLKTIPWSE------YGFEGYGLSLVASQRFVQRHP 227
           ++DA  N   + P   +   + D  +     +E      +G E     L   + FV+++P
Sbjct: 182 EIDAMSN---LDPVITKLEDDGDVIILADSRTEAGNEKIFGGENPAAVLYMKRDFVEQNP 238

Query: 228 EVAKKFVKA-YQQAQKNAIADPAAAAAAL 255
              +K V A Y+  Q   IA P   AA +
Sbjct: 239 VTTQKLVNAFYKSLQWLKIATPEDVAAVV 267