Pairwise Alignments

Query, 278 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 273 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  129 bits (323), Expect = 9e-35
 Identities = 77/260 (29%), Positives = 138/260 (53%)

Query: 12  SRAMPTIKPKALHLKAQADRFAPWLALLVLLLVWEAACRLLKLPSFVLPSPSAIFAATQK 71
           ++A+P ++P A++  A   R    +  +++LLV E   R+  LPS+ +P+PS I      
Sbjct: 5   TQALPLVEPVAINRSAWPRRLKGLVLPVLILLVLEVVVRVGWLPSYQMPAPSEIAVTLTD 64

Query: 72  VGLGTWAEHIFATLRVTLMGYGLSILIGIPLAIALASSRVMSRTLYPLLVIVQSTPIVAV 131
           +  G+  +HI A+L   L+G+ +   + +  A  +  SR     L P    ++S P +A 
Sbjct: 65  LAEGSLWKHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAW 124

Query: 132 APIIVVVMGAGDLPRVFITFLIAFFPIVVSCVTGLLATPEELVELSRSLGASKAREYRNI 191
            P++++ +G  +  ++ +  + AFFP+ ++ V  +     +LVE+ +  G S+ R  R I
Sbjct: 125 VPLLLLWLGIDETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFSRWRLVRRI 184

Query: 192 RLPYAIPHLFSALRISITLAVIGAVVAEFVAAEKGLGYFINFSTSMFQVPQAFAALMMLV 251
            LP A+P LF+ LR  ++LA +  V AE +AA KGLGY ++      +     AA+++L 
Sbjct: 185 LLPAALPGLFTGLRSGLSLAWMFLVAAELIAATKGLGYLLSDGRETSRPDIVLAAIIVLA 244

Query: 252 VISLVLFHLIGLLQKVCFPW 271
            +  V   L+  L+K C  W
Sbjct: 245 SLGKVSDGLLATLEKRCLAW 264