Pairwise Alignments

Query, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

Subject, 232 a.a., ABC transporter for L-Arginine, permease component 2 (from data) from Pseudomonas simiae WCS417

 Score =  211 bits (536), Expect = 1e-59
 Identities = 106/224 (47%), Positives = 156/224 (69%), Gaps = 3/224 (1%)

Query: 1   MTWEIFIKW--LPSFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIF 58
           M ++  + W  +P ++ G   TL+L+ +S+  GL+ A+PLG+ R S+   V    + Y +
Sbjct: 1   MIFDYNVIWEAMPLYLGGLLTTLKLLAISLFFGLLAALPLGLMRVSKQPIVNGAAWLYTY 60

Query: 59  FFRGTPLLVQLFLVYYGMAQFDVVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAI 118
             RGTP+LVQLFL+YYG+AQF+ VR+S LWP L    +CA +   ++T+AY AEII G++
Sbjct: 61  VIRGTPMLVQLFLIYYGLAQFEAVRESFLWPLLSSATFCACLAFAINTSAYTAEIIAGSL 120

Query: 119 QNVPHGEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLEL 178
           +  P+GEIEAA+A+GMSR +    I+LP A R  LP YSNEVI+ML+ ++LAS +TL+++
Sbjct: 121 KATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDI 180

Query: 179 TGMARKIAARTYLHEEMFLTAGLIYLLIAFILMQGFKLLE-RWL 221
           TG AR + A+ YL  E ++TAG+ YL + FIL++ FKL E RWL
Sbjct: 181 TGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKLAERRWL 224