Pairwise Alignments

Query, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

Subject, 229 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  356 bits (914), Expect = e-103
 Identities = 175/229 (76%), Positives = 199/229 (86%)

Query: 1   MTWEIFIKWLPSFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFFF 60
           M W + IKWLP    GA LTL+LV ++VIAGL++A+PLGIARSSR   V ALPY YIFFF
Sbjct: 1   MNWAVIIKWLPKLAQGAILTLELVAIAVIAGLLLAIPLGIARSSRRWYVSALPYAYIFFF 60

Query: 61  RGTPLLVQLFLVYYGMAQFDVVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQN 120
           RGTPLLVQLFLVYYG+AQFD VR+S +WPYLRDP+WCA  TMTLHTAAYIAEI+RGAIQ 
Sbjct: 61  RGTPLLVQLFLVYYGLAQFDSVRESFMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQA 120

Query: 121 VPHGEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTG 180
           +P GEIEAARALGMS+ + L +IILPRA+RIGLPAYSNEVILMLKASALAST+TLLELTG
Sbjct: 121 IPPGEIEAARALGMSKPKTLFYIILPRASRIGLPAYSNEVILMLKASALASTVTLLELTG 180

Query: 181 MARKIAARTYLHEEMFLTAGLIYLLIAFILMQGFKLLERWLRVDACQGR 229
           MAR I ARTYL  E+F  AGL YLL+A++L++GFKLLERWLRVDACQGR
Sbjct: 181 MARTIIARTYLPVEIFFAAGLFYLLMAYVLVRGFKLLERWLRVDACQGR 229