Pairwise Alignments

Query, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

Subject, 229 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  172 bits (437), Expect = 4e-48
 Identities = 93/220 (42%), Positives = 137/220 (62%), Gaps = 4/220 (1%)

Query: 8   KWLPSFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFFFRGTPLLV 67
           K+ P  + GAW TL L+ +SV  G ++A+ L  A+ S     + L   Y  FFRGTPLL+
Sbjct: 8   KYWPLLLSGAWQTLALLVISVSIGFVLAIGLAFAQVSGGRVTKILARAYCTFFRGTPLLI 67

Query: 68  QLFLVYYGMAQF----DVVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVPH 123
           QL+L+YYG+  F      +RQS +WP LR+ ++ A ++ TL+ AAY AE++RGA+  VP 
Sbjct: 68  QLWLLYYGVGSFLPMIPGLRQSFMWPVLREGFFFAAVSFTLNYAAYEAEVLRGALLAVPK 127

Query: 124 GEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMAR 183
           GE+EA RA GM R   +  I LPRA RI LP  + EV++ LKA+ LA T+T+++L  +A 
Sbjct: 128 GELEAGRAFGMGRFTLIRRIWLPRAIRIALPTITGEVVMQLKATPLAFTVTVMDLYAVAY 187

Query: 184 KIAARTYLHEEMFLTAGLIYLLIAFILMQGFKLLERWLRV 223
           K+   T L  E  +   + YL++  I+ + F L+ER + V
Sbjct: 188 KVRQDTLLVYEPLIVVTVFYLILTAIIARCFGLVERQVPV 227