Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  324 bits (831), Expect = 1e-93
 Identities = 162/267 (60%), Positives = 196/267 (73%), Gaps = 1/267 (0%)

Query: 9   PRFWRDAALPFLEARAVADGRKVCYAPHCHETFSIGAITAGASTYFNGDAQERIARGTLV 68
           PRFWRD  LPF+EAR +ADGRKV Y+ H HE FSIG +T G S Y  G     I+ GT+V
Sbjct: 13  PRFWRDERLPFVEARTIADGRKVTYSRHAHEHFSIGVVTTGRSYYHYGAETFEISAGTVV 72

Query: 69  LINPQTVHACNPIDGRPWSYLMFYVDARWLGALQHELGVSSDGHFIPYAPIQSLDQALFN 128
           L+NP  VHACNPI   PWSY M Y+D  WL  LQH+LG S++  + P+    + D  L+ 
Sbjct: 73  LMNPGDVHACNPIANEPWSYQMVYIDTPWLTDLQHQLGFSTEQGYRPFNTPYTRDTVLYE 132

Query: 129 GLTQLYATLRDPQADTLRKQSAAVEYFTLLQQTLAPAPTQPHAEPLQQLSRAADYIAEHC 188
           GL +LY  L D QA+ L+KQS+ V YFT +QQ L P+ T P  E   +L RAADYI EHC
Sbjct: 133 GLLELYGILVDEQAEHLQKQSSLVSYFTEVQQRLNPSDT-PVREVNHKLERAADYIREHC 191

Query: 189 TEALRLEDICQAAELSPSYLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALA 248
           T+ALRLEDIC AAELSPSYLIR FKQ+YG+TPHA+L+N+RIQ ++  LRQG  +A++ALA
Sbjct: 192 TDALRLEDICVAAELSPSYLIRAFKQYYGLTPHAFLVNQRIQFARAQLRQGELIADVALA 251

Query: 249 AGFADQAHFQRTFKRQLAATPGQYRDR 275
           AGFADQAHFQRTFK+  AATPGQYRDR
Sbjct: 252 AGFADQAHFQRTFKQHFAATPGQYRDR 278