Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 279 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 78/265 (29%), Positives = 117/265 (44%), Gaps = 4/265 (1%)

Query: 10  RFWRDAALPFLEARAVADGRKVCYAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVL 69
           R+W    LP ++    AD     YAPH H +F I     G + + +    +   +  L++
Sbjct: 11  RYWHVPDLPGMDMLH-ADFTTHEYAPHVHHSFVIAVTEVGGAEFKSRGRTDIAHQQALLV 69

Query: 70  INPQTVHACNPIDGRPWSYLMFYVDARWLGALQHELGVSSDGHFIPYAPIQSLDQALFNG 129
            NP   H+        W Y  FY+    +  L   LG+    +F+          A F  
Sbjct: 70  FNPSEPHSGRMGGSSRWRYRAFYLAEPGIRHLLTTLGIDQTRYFMSNILGDRELIASFLE 129

Query: 130 LTQLYATLRDPQADTLRKQSAAVEYFTLLQQTLAPAPTQPHAEPL--QQLSRAADYIAEH 187
           L + +   R+ Q D LR+Q   V  F  L Q+   A  +    P   Q L+   + + + 
Sbjct: 130 LHRAFDGHRE-QWDALRQQELFVHSFGSLFQSHGQAGQRVLGVPADAQVLAPVLELLHDA 188

Query: 188 CTEALRLEDICQAAELSPSYLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIAL 247
             E L LE +  AA+L+P  LI  F +  G+TPH YL   R++ +   L  G  L E A+
Sbjct: 189 FAERLTLEQMAAAADLTPFQLIGAFNRTIGLTPHTYLTQLRLRAAIAQLAAGRPLIEAAI 248

Query: 248 AAGFADQAHFQRTFKRQLAATPGQY 272
           A+GF DQ+   + FKR    TP QY
Sbjct: 249 ASGFYDQSALTKHFKRTFGMTPLQY 273