Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 269 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  165 bits (417), Expect = 1e-45
 Identities = 107/269 (39%), Positives = 134/269 (49%), Gaps = 7/269 (2%)

Query: 7   SQPRFWRDAALPFLEARAVADGRKVCYAPHCHETFSIGAITAGASTYFNG--DAQERIAR 64
           S    WRD AL  +E+R     R  CY  H H TFSIGA+ AG S +F G  D Q+ +A 
Sbjct: 4   SHADLWRDPALAHVESRRACHSR-ACYKAHSHPTFSIGAVDAGRS-HFTGAADGQQHLAP 61

Query: 65  GTLVLINPQTVHACNPIDGRPWSYLMFYVDARWLGALQHELGVSSDGHFIPYAPIQSLDQ 124
           GTLVL+    VHACNP  G  WSY M +VDA WL  L+ E G+   G      P++   +
Sbjct: 62  GTLVLVPAHRVHACNPAPGLAWSYQMLHVDADWLTQLRLESGL---GGIEAGEPVRICRE 118

Query: 125 ALFNGLTQLYATLRDPQADTLRKQSAAVEYFTLLQQTLAPAPTQPHAEPLQQLSRAADYI 184
           A           L    A    K +A + +   L  +  P      A     L+     I
Sbjct: 119 AEVYRQFCALNRLLFSSACNGEKDAALIAFLGDLDFSAHPPLAAAPALQAATLNGLLARI 178

Query: 185 AEHCTEALRLEDICQAAELSPSYLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAE 244
                  L LE + + A L    LIR F+   G TPHAYLLN R+ R +  L +GL LAE
Sbjct: 179 EHQDPAQLSLEVLAREAGLGRYQLIRAFRAATGFTPHAYLLNARVNRGRQLLSEGLALAE 238

Query: 245 IALAAGFADQAHFQRTFKRQLAATPGQYR 273
           +A   GFADQ+HFQR FK  +  TPGQYR
Sbjct: 239 VAYQLGFADQSHFQRVFKAHVGVTPGQYR 267