Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  105 bits (261), Expect = 1e-27
 Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 13/250 (5%)

Query: 33  YAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVLINPQTVHACNPIDGRPWSYLMFY 92
           Y PH H++F +G    G   +     + R   G + L+ P  +H         ++Y   Y
Sbjct: 27  YDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDGLAPTEEGFTYSTLY 86

Query: 93  VDARWLGALQHELGVSSDGHFIP-YAPIQSLDQALFNGLTQLYATLRDPQADTLRKQSAA 151
           ++  WL      L   + G  +P +A     D+ L       +  + D     +R Q+A 
Sbjct: 87  LEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAVHDQDLRIVR-QTAM 145

Query: 152 VEYFTLL------QQTLAPAPTQPHAEPLQQLSRAADYIAEHCTEALRLEDICQAAELSP 205
            +    L      ++ + P P  P         RA D++  +    + LED+ QA  +  
Sbjct: 146 DDLLACLTRHLHWRRRINPDPRLPLTA-----QRARDFLHANLERDIGLEDLAQACGIDR 200

Query: 206 SYLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQL 265
             L R FK  +G+ PHAYL+  R+ R++  L QG   AE+A+A GFADQ+H  R F+R  
Sbjct: 201 FRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFADQSHLGRWFRRAY 260

Query: 266 AATPGQYRDR 275
             TP  YR R
Sbjct: 261 QLTPADYRRR 270