Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  117 bits (294), Expect = 2e-31
 Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 5/243 (2%)

Query: 33  YAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVLINPQTVHACNPIDGRPWSYLMFY 92
           +APH HE +    I +GA  +++  ++     G++VLINP  +H         W Y  FY
Sbjct: 32  FAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVGSMVLINPDELHTGATAHEAGWRYRGFY 91

Query: 93  VDARWLGALQHELGVSSDGHFIPYAPIQSLDQALFNGLTQLYATLRDPQADTLRKQSAAV 152
            +   +  +  EL +   G    +      D AL    +QL+  L +  A  L++Q+A  
Sbjct: 92  PEHERVTGVLDELELGRHG-MPSFKDSVIHDPALALAFSQLHQ-LSEASASALQQQTAWR 149

Query: 153 EYFTLLQQTLAPA--PTQPHAEPLQQLSRAADYIAEHCTEALRLEDICQAAELSPSYLIR 210
           +    L Q       P+ P  EPL  ++RA + +     +   LE +  A  LSP +  R
Sbjct: 150 QAVLALVQRHGQCAEPSAPGHEPLA-VARARELLESQLADPPSLEALAAAVNLSPFHFAR 208

Query: 211 TFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQLAATPG 270
            F+Q  G+ PHA+L  RR+ R++  L+ GL  +++A   GFADQ+H  R FK+    TPG
Sbjct: 209 VFRQATGLPPHAWLKQRRLARAREMLKHGLAASQVAFDLGFADQSHLSRQFKQAYGVTPG 268

Query: 271 QYR 273
            YR
Sbjct: 269 AYR 271