Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 279 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 5/246 (2%)

Query: 33  YAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVLINPQTVHACNPIDGRPWSYLMFY 92
           Y PH H+++ IG    G   +     +     G + L+ P  +H  +      ++Y M Y
Sbjct: 29  YDPHWHDSYLIGVTEQGVQQFNCRRTRHHSVPGQVFLVEPGELHDGDAPTAGGFTYHMLY 88

Query: 93  VDARWLGA-LQHELGVSSDGHFIPYAPIQSLDQALFNGLTQLYATLRDPQADTLRKQSAA 151
           +D  WL   +      +  G  + +    + D  L    +Q + TL   +   +R+++  
Sbjct: 89  LDPHWLAREVSAVFEEAPQGSQLSFTSTLTSDPRLALATSQAFRTLHSGELRIVRQRAMD 148

Query: 152 VEYFTLLQQTLAPAPTQPHAEPLQQL--SRAADYIAEHCTEALRLEDICQAAELSPSYLI 209
                L  Q      T+   +P   L   +A +Y+  H    + ++++  A  +    L 
Sbjct: 149 QLLERLTGQLYWR--TRYREDPRLPLVAHKAREYLHAHLQVDVGMDELALACGVDRFRLT 206

Query: 210 RTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQLAATP 269
           R FK  +G+ PHAYL+  R+ R++H L +G   AE+A+A GFADQ+H  R F R    TP
Sbjct: 207 RAFKSAFGLPPHAYLVQLRLARARHLLARGEQPAEVAIALGFADQSHLGRWFVRAYGLTP 266

Query: 270 GQYRDR 275
             YR R
Sbjct: 267 AAYRKR 272