Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 273 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  120 bits (300), Expect = 4e-32
 Identities = 89/270 (32%), Positives = 131/270 (48%), Gaps = 14/270 (5%)

Query: 10  RFWRDAALPFLEARAVADGRKVCYAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVL 69
           RFWRD     +E  + A      Y+PH H+TFSIGAI +G+         E+   G L L
Sbjct: 10  RFWRDRRFGGMECLS-ATFLTHEYSPHAHDTFSIGAIESGSQISTIQGTTEQTGPGHLYL 68

Query: 70  INPQTVHACNPIDGRPWSYLMFYVDARWLGALQHEL------GVSSDGHFIPYAPIQSLD 123
           INP  VH   P  G  + Y M Y DA  L  +  ++      G+ S   F+P  P  +  
Sbjct: 69  INPDEVHDGAP-GGGGYRYRMIYPDAELLRDIIEDVTGRVFHGMPSFPKFLPRDPQMAAS 127

Query: 124 QALFNGLTQLYATLRDPQADTLRKQSAAVEYFTLLQQTLAPAPTQPHAEPLQQLSRAADY 183
             + +   +L A     +AD       A  +       +    T+        +  A DY
Sbjct: 128 FQMAH--RRLEAKTGALEADEGMFSVLAALFGRHGSAIILAVETREKTA----VYNARDY 181

Query: 184 IAEHCTEALRLEDICQAAELSPSYLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLA 243
           + ++    + LE++   A LS ++LIR F++ + +TPHAYL + RI++++  LR G   A
Sbjct: 182 LTDNYETDIGLEELASIAGLSRAHLIRAFRKEFHITPHAYLTDVRIRQARRLLRAGEMPA 241

Query: 244 EIALAAGFADQAHFQRTFKRQLAATPGQYR 273
           E+A   GFADQAHF R FK +   TPGQ+R
Sbjct: 242 EVAALCGFADQAHFTRHFKARTGVTPGQFR 271