Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 298 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 20/246 (8%)

Query: 33  YAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVLINPQTVHACNPIDGRPWSYLMFY 92
           YAPH H+T+++G   +G  T+           G +++++P  +H           Y M Y
Sbjct: 61  YAPHRHDTYALGVTLSGVQTFSYRGTSHFSMPGNVIVLHPDEIHDGGAGTDEGLHYRMLY 120

Query: 93  VDARWLGALQHELGVSSDGHFIPYAPIQSLDQALFNG-LTQLYATLRDPQADTLRKQSAA 151
                   L  E    +  + +P+A    ++   F   LT+    L D + D+L      
Sbjct: 121 --------LPPEKTTEAGYNTLPFARSAVIEDEEFRQCLTEALGNL-DGEPDSLLLTDWQ 171

Query: 152 VEYFTLLQQTLAPAPTQPHAEPLQQLSRAA-----DYIAEHCTEALRLEDICQAAELSPS 206
                LL +      +   A  ++ + RAA     DY+ E+  + +  +++ Q + L   
Sbjct: 172 SRLSDLLWKH-----SNGSARSIKWIDRAAVLLCRDYLLENSADTVVSQELEQISGLDRF 226

Query: 207 YLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQLA 266
            L R F+  +G +PH YL+ RR+Q+ +  +R G  LAE A A GFADQAHF R FK    
Sbjct: 227 TLFRHFRCVFGTSPHRYLIMRRLQKCKDMMRAGASLAETAFACGFADQAHFTRHFKNAFG 286

Query: 267 ATPGQY 272
             PG++
Sbjct: 287 MPPGRW 292