Pairwise Alignments

Query, 1360 a.a., ATP-dependent helicase HrpA from Pseudomonas stutzeri RCH2

Subject, 1303 a.a., ATP-dependent helicase HrpA from Pseudomonas simiae WCS417

 Score = 2118 bits (5487), Expect = 0.0
 Identities = 1062/1359 (78%), Positives = 1183/1359 (87%), Gaps = 57/1359 (4%)

Query: 1    MTDATPAIDTLLKNLDQALFADRHRLRRQLHELRKQPDEAKLAQWLERFQASVAKVEARR 60
            MTD  PAID LL NLD A+ ADRHRLRRQL ELRK+PDE KLAQW+ R QAS A+V ARR
Sbjct: 1    MTDQAPAIDQLLNNLDHAMLADRHRLRRQLLELRKKPDEEKLAQWVARMQASCAQVTARR 60

Query: 61   RSVPSIRYDDSLPIAAKRDEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGVHGLI 120
             S+P IRYDDSLPIAAKRDEIK AL KHQVL+IAGETGSGKTTQLPKICLEIGRG  GLI
Sbjct: 61   ASLPVIRYDDSLPIAAKRDEIKEALNKHQVLIIAGETGSGKTTQLPKICLEIGRGQFGLI 120

Query: 121  GHTQPRRLAARSVATRVAEEIGTPLGELVGYQVRFEDQSKDSSLIKLMTDGILLAETQHD 180
            GHTQPRR+AARSVA+RVAEE+ TPLG LVGYQVRFEDQS  ++LIKLMTDGILLAETQ+D
Sbjct: 121  GHTQPRRIAARSVASRVAEELATPLGALVGYQVRFEDQSDSNTLIKLMTDGILLAETQND 180

Query: 181  RFLERYDTIIVDEAHERSLNIDFLLGFLKTLLPRRPDLKVIITSATIDLQRFSEHFDGAP 240
            R+LERYDTIIVDEAHERSLNIDFLLG+LKTLLPRRPDLKVIITSATIDL+RFS+HFD AP
Sbjct: 181  RYLERYDTIIVDEAHERSLNIDFLLGYLKTLLPRRPDLKVIITSATIDLERFSKHFDDAP 240

Query: 241  IVEVSGRTYPVETWYRPLAAEIDEDGNRVEDDLTVDQGILAALDEITAHEQSVGKRPGDV 300
            IVEVSGRT+PV+TWYRPL  E DE+GNRVEDDLTVDQ ILA LDEI A+E+S  + PGDV
Sbjct: 241  IVEVSGRTFPVDTWYRPLTLEQDEEGNRVEDDLTVDQAILATLDEIAAYERSERRSPGDV 300

Query: 301  LVFLPGEREIRDAAEVLRKANLKFTEVLPLYARLTPAEQQKIFQPRPGRKIVLATNVAET 360
            LVFLPGEREIRDAAEVLRKA LK TE+LPLYARL+PAEQQ+IFQ  PGR++VLATNVAET
Sbjct: 301  LVFLPGEREIRDAAEVLRKAQLKHTEILPLYARLSPAEQQRIFQSHPGRRVVLATNVAET 360

Query: 361  SLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICIRLYS 420
            SLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEA+SQASANQRKGRCGRVEPGIC+RLYS
Sbjct: 361  SLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAISQASANQRKGRCGRVEPGICVRLYS 420

Query: 421  EEDFLGRPEFTDPEILRTNLAAVILQMLHLRLGDIQDFPFIEPPDGKAISDGFNLLQELS 480
            EEDF+GRPEFTDPEILRTNLAAVILQMLHLRLG+I DFPFIEPPDGKAISDGFNLLQELS
Sbjct: 421  EEDFIGRPEFTDPEILRTNLAAVILQMLHLRLGEITDFPFIEPPDGKAISDGFNLLQELS 480

Query: 481  AVNRENQLTPMGRQLARLPIDPRLGRMLLEAAQQGSLAEVLIVASALSVQDVRERPADRQ 540
            AV+R +QLTP+GRQLARLP+DPR+GRMLLEAA+ GSL EVLIVASA+S+QD RERP +RQ
Sbjct: 481  AVDRNSQLTPLGRQLARLPVDPRMGRMLLEAAKLGSLQEVLIVASAMSIQDPRERPPERQ 540

Query: 541  QAADQAHAQWKDPDSDFAALINLWRGFEEKRQELGSNPLRTWCRKNFLNYLRLREWRDAH 600
            QAADQAHAQWKDPDSDFA L+NLWRGFEE+RQEL ++PLR WCRKNFLNYLRLREWRD+H
Sbjct: 541  QAADQAHAQWKDPDSDFAGLVNLWRGFEEQRQELTASPLRNWCRKNFLNYLRLREWRDSH 600

Query: 601  RQLTLIARELKLGSGRSADGSGQAAHADKARRVEDGEASSALSAGVSTQPAPTKDTKVNV 660
            RQL+LI R+++L                                 V+ +PA         
Sbjct: 601  RQLSLICRDMQLT--------------------------------VNKEPA--------- 619

Query: 661  ILRQQAEASEAAQKAKSYASVHKAILAGLLSQIGNKTEEGDFLGARQRRFWVHPSSVIGR 720
                             +  +HKA+L+GLLSQIG KTE+GD+LGARQRRFW+HPSS IG+
Sbjct: 620  ----------------DFPKLHKAVLSGLLSQIGQKTEDGDYLGARQRRFWIHPSSGIGK 663

Query: 721  KKPNWLMAAELVETTKLFARMVAKIEPDWIEPLAGHLIKKNHFEPHWEKKRGQVVAYEQV 780
            K+P WLM AELVETTKL+ARMVAKI+ DWIEPLAGHLIKKNHFEPHWEKKRGQVVA+EQ+
Sbjct: 664  KRPQWLMTAELVETTKLYARMVAKIDADWIEPLAGHLIKKNHFEPHWEKKRGQVVAFEQI 723

Query: 781  TLYGMIVVGRRPVHYGPIDPPAARELFIREGLVRGEINSRARALSANRELLERLDELEAK 840
            TL+G+IVVGRRPVHYGPIDP  +RELFIREGLVRGEI SRA+ L+AN++LLE+LDELEAK
Sbjct: 724  TLFGLIVVGRRPVHYGPIDPVVSRELFIREGLVRGEIQSRAKCLTANQQLLEQLDELEAK 783

Query: 841  ARRRDILADEETLFDYYDARLPADIYQTASFENWYKRESAKNPQLLIMREEDVLAREASE 900
            ARRRDILADEETL+ +YDARLPA+I+QTA+F++WYK  S K+PQLLIMREEDVLAREASE
Sbjct: 784  ARRRDILADEETLYAFYDARLPAEIHQTATFDSWYKINSQKDPQLLIMREEDVLAREASE 843

Query: 901  VTAAQYPDYLRIGELQLPLEYHFEPNHPRDGVTLRVPAPLLPQLRSERLDWLVPGLLETK 960
            VTAA YPD L +G+L+L L YHFEPNHPRDGVTLRVPAPLLP L  ERL+WLVPG++E K
Sbjct: 844  VTAAHYPDTLHLGDLELALSYHFEPNHPRDGVTLRVPAPLLPALPPERLEWLVPGVIEAK 903

Query: 961  AVALVRNLPKALRKNFVPVPDFVGAALARIAFGEGSLPEALGRELLRMTGARVSDDAWAE 1020
             +ALVRNLPKALRKNFVPVPDFV AAL RI FG+GSLP+ALGRELLRMTGARVSD+AWAE
Sbjct: 904  CIALVRNLPKALRKNFVPVPDFVKAALQRIEFGQGSLPQALGRELLRMTGARVSDEAWAE 963

Query: 1021 AAAGLESHLKMNIEVVDARGKFLGEGRDLAELTARFAEASQAALAPPQQKAEQKPVEAKG 1080
            AA  +ESHLKMN+EVVD +GKFLGEGRDLAELTARFAEASQAALA PQ    Q+PVEAK 
Sbjct: 964  AAQQVESHLKMNLEVVDGQGKFLGEGRDLAELTARFAEASQAALAVPQTAKSQQPVEAKV 1023

Query: 1081 FAQVAEKAQAKMAGLSMTVYPALVEEAGVVKEGRFPTQAEAEWQHRRALQRLLLQQLAEP 1140
            FA VAEK Q K+AGLSMTVYPALVEE G VKEGRF T AEAE+QHRRALQRLL+QQLAEP
Sbjct: 1024 FAAVAEKTQQKIAGLSMTVYPALVEEGGTVKEGRFSTAAEAEFQHRRALQRLLMQQLAEP 1083

Query: 1141 AKYLRNKLPGLTELGLLYRDMGKVDALVEDILLASLDSCILDGEAQLPRDGAALASLAER 1200
            AK+LR KLPGLTELGL+YR++G++DALVEDILLASLD+C+L+GE  LPRDGA LA+LAER
Sbjct: 1084 AKFLRGKLPGLTELGLMYRELGRIDALVEDILLASLDTCVLEGETNLPRDGAGLAALAER 1143

Query: 1201 KRGDWTAHAERLARLTLEILKHWHGLQKRFKGKIDLAQAVALNDIKAQLGNLVYPGFVRE 1260
            KRG WT HAERLARLTL++LK WHGLQKRFKGKIDLAQAVALNDIK QL +LVYPGFVRE
Sbjct: 1144 KRGSWTEHAERLARLTLDVLKLWHGLQKRFKGKIDLAQAVALNDIKQQLSHLVYPGFVRE 1203

Query: 1261 TPAEWLKEYPRYLKAIEQRFEKIGAQLQRDRVWSGELAGYWEQYQTRLNKHLQEGKRDAE 1320
            TPA W KE PRYLKAIE R EK+ +Q+Q+DRVWSGELAG W  Y+ RL KH QEGKRD +
Sbjct: 1204 TPAHWFKELPRYLKAIELRLEKLPSQVQKDRVWSGELAGLWTHYENRLKKHAQEGKRDPQ 1263

Query: 1321 LALYRWMLEEYRVSLWAQQLGTRMAVSDKRLNKQWSQVE 1359
            L LYRW LEEYRVSL+AQQLGT++ +SDKRL+KQWS VE
Sbjct: 1264 LELYRWWLEEYRVSLFAQQLGTKVPISDKRLSKQWSLVE 1302