Pairwise Alignments

Query, 1360 a.a., ATP-dependent helicase HrpA from Pseudomonas stutzeri RCH2

Subject, 1301 a.a., ATP-dependent helicase HrpA from Pseudomonas putida KT2440

 Score = 2065 bits (5351), Expect = 0.0
 Identities = 1041/1359 (76%), Positives = 1166/1359 (85%), Gaps = 59/1359 (4%)

Query: 1    MTDATPAIDTLLKNLDQALFADRHRLRRQLHELRKQPDEAKLAQWLERFQASVAKVEARR 60
            MTD   AID LL+NLD A+ ADRH LRRQLHELRK+PDEAKLAQW+E+ QAS A+V AR+
Sbjct: 1    MTDH--AIDKLLQNLDHAMIADRHCLRRQLHELRKRPDEAKLAQWVEKVQASCAQVTARQ 58

Query: 61   RSVPSIRYDDSLPIAAKRDEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGVHGLI 120
            +SVP++RYDD+LPIAAKRDEIK AL ++QVLVIAGETGSGKTTQLPKICLE+GRG HGLI
Sbjct: 59   QSVPTVRYDDNLPIAAKRDEIKKALAENQVLVIAGETGSGKTTQLPKICLELGRGSHGLI 118

Query: 121  GHTQPRRLAARSVATRVAEEIGTPLGELVGYQVRFEDQSKDSSLIKLMTDGILLAETQHD 180
             HTQPRR+AARSVA RVAEE+GTPLG LVGYQVRFEDQS  ++L+KLMTDGILLAETQHD
Sbjct: 119  AHTQPRRIAARSVAARVAEELGTPLGALVGYQVRFEDQSDSNTLVKLMTDGILLAETQHD 178

Query: 181  RFLERYDTIIVDEAHERSLNIDFLLGFLKTLLPRRPDLKVIITSATIDLQRFSEHFDGAP 240
            RFLERYDTIIVDEAHERSLNIDFLLG+LKTLL RRPDLK+IITSATIDL+RFS HFDGAP
Sbjct: 179  RFLERYDTIIVDEAHERSLNIDFLLGYLKTLLHRRPDLKLIITSATIDLERFSRHFDGAP 238

Query: 241  IVEVSGRTYPVETWYRPLAAEIDEDGNRVEDDLTVDQGILAALDEITAHEQSVGKRPGDV 300
            I+EVSGRT+PV+TWYRPL +E DE+GN++EDDLTVDQ ILA LDE+  HE+S GK PGDV
Sbjct: 239  IIEVSGRTFPVDTWYRPLTSEQDEEGNQIEDDLTVDQAILATLDELAQHERSEGKGPGDV 298

Query: 301  LVFLPGEREIRDAAEVLRKANLKFTEVLPLYARLTPAEQQKIFQPRPGRKIVLATNVAET 360
            L+FLPGEREIRDAAE+LRKA L+ TE+LPLYARL+PAEQQ+IFQP  GR++VLATNVAET
Sbjct: 299  LIFLPGEREIRDAAEILRKAQLRHTEILPLYARLSPAEQQRIFQPHTGRRVVLATNVAET 358

Query: 361  SLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICIRLYS 420
            SLTVPGIRYVID+GTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGIC+RLYS
Sbjct: 359  SLTVPGIRYVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYS 418

Query: 421  EEDFLGRPEFTDPEILRTNLAAVILQMLHLRLGDIQDFPFIEPPDGKAISDGFNLLQELS 480
            EEDF  RP FTDPEILRTNLAAVILQMLHLRLG I  FPFIEPPDGKAISDGFNLLQELS
Sbjct: 419  EEDFNSRPAFTDPEILRTNLAAVILQMLHLRLGAIDAFPFIEPPDGKAISDGFNLLQELS 478

Query: 481  AVNRENQLTPMGRQLARLPIDPRLGRMLLEAAQQGSLAEVLIVASALSVQDVRERPADRQ 540
            AVNRENQLTP+GRQLARLPIDPRLGRMLLE A+ GSL EVLIV SALSVQD RERP +RQ
Sbjct: 479  AVNRENQLTPIGRQLARLPIDPRLGRMLLEGARLGSLQEVLIVTSALSVQDPRERPPERQ 538

Query: 541  QAADQAHAQWKDPDSDFAALINLWRGFEEKRQELGSNPLRTWCRKNFLNYLRLREWRDAH 600
            QAADQAHAQWKD DSDFAAL+NLWRGFEE+RQ L +NPLR WCRK FLNYLRLREWRD  
Sbjct: 539  QAADQAHAQWKDVDSDFAALVNLWRGFEEQRQALTANPLRNWCRKQFLNYLRLREWRD-- 596

Query: 601  RQLTLIARELKLGSGRSADGSGQAAHADKARRVEDGEASSALSAGVSTQPAPTKDTKVNV 660
                                    AH   A    D      L   V+ +P          
Sbjct: 597  ------------------------AHRQLALICRD------LQLTVNKEPT--------- 617

Query: 661  ILRQQAEASEAAQKAKSYASVHKAILAGLLSQIGNKTEEGDFLGARQRRFWVHPSSVIGR 720
                             Y  +HKAIL+GLLSQIG KTEEGD+ GARQRRFWVHPSS +GR
Sbjct: 618  ----------------DYQKLHKAILSGLLSQIGQKTEEGDYQGARQRRFWVHPSSGLGR 661

Query: 721  KKPNWLMAAELVETTKLFARMVAKIEPDWIEPLAGHLIKKNHFEPHWEKKRGQVVAYEQV 780
            K+P W+MAAELVETTKL+ARMVAKIEPDWIEPLAGHLIKKNHFEPHWEKKRGQVVAYEQ+
Sbjct: 662  KRPQWVMAAELVETTKLYARMVAKIEPDWIEPLAGHLIKKNHFEPHWEKKRGQVVAYEQI 721

Query: 781  TLYGMIVVGRRPVHYGPIDPPAARELFIREGLVRGEINSRARALSANRELLERLDELEAK 840
            TLYG+I+VGRRPVHYGPIDP  +RELFIREGLV GEI SRA+ L+AN+ LL  LDELEAK
Sbjct: 722  TLYGLILVGRRPVHYGPIDPATSRELFIREGLVGGEIQSRAKCLAANKRLLGELDELEAK 781

Query: 841  ARRRDILADEETLFDYYDARLPADIYQTASFENWYKRESAKNPQLLIMREEDVLAREASE 900
            ARRRDILADEETL+ +Y+ARLPA+I+QTA+F++WY+  S K+  LLIMREEDVLAREASE
Sbjct: 782  ARRRDILADEETLYAFYEARLPAEIHQTATFDSWYRMGSQKDANLLIMREEDVLAREASE 841

Query: 901  VTAAQYPDYLRIGELQLPLEYHFEPNHPRDGVTLRVPAPLLPQLRSERLDWLVPGLLETK 960
            VTAAQYPD +++G+L+LPL YHFEP HPRDGVT+RVPAPLLP L  ERL+WLVPGLLE K
Sbjct: 842  VTAAQYPDSMQVGDLRLPLSYHFEPGHPRDGVTVRVPAPLLPSLPGERLEWLVPGLLEAK 901

Query: 961  AVALVRNLPKALRKNFVPVPDFVGAALARIAFGEGSLPEALGRELLRMTGARVSDDAWAE 1020
             VALVRNLPKALRKNFVPVPDFV A+LAR+ FG+G+LP+ALG+ELLRMTGARVSD+AW E
Sbjct: 902  CVALVRNLPKALRKNFVPVPDFVKASLARMTFGQGALPQALGQELLRMTGARVSDEAWDE 961

Query: 1021 AAAGLESHLKMNIEVVDARGKFLGEGRDLAELTARFAEASQAALAPPQQKAEQKPVEAKG 1080
            +   +E HL+MNIEVVD +GKFLGEGRDLAELTARFA ASQAALA P+    ++PV+AK 
Sbjct: 962  SVNQVEGHLRMNIEVVDGQGKFLGEGRDLAELTARFAAASQAALAVPRDAKGEQPVQAKA 1021

Query: 1081 FAQVAEKAQAKMAGLSMTVYPALVEEAGVVKEGRFPTQAEAEWQHRRALQRLLLQQLAEP 1140
            F++V + AQ K+AGLSMTVYPALVE+ G V+EGRF TQAEAE+QHRRALQRLLLQQLAEP
Sbjct: 1022 FSEVKQTAQQKIAGLSMTVYPALVEDNGTVREGRFSTQAEAEFQHRRALQRLLLQQLAEP 1081

Query: 1141 AKYLRNKLPGLTELGLLYRDMGKVDALVEDILLASLDSCILDGEAQLPRDGAALASLAER 1200
            AK+LR KLPGLTELGLLYR+MG+V+ALVEDILLASLDSCIL+GE  LPR+GAALA+LAER
Sbjct: 1082 AKFLRGKLPGLTELGLLYREMGRVEALVEDILLASLDSCILEGEQPLPREGAALAALAER 1141

Query: 1201 KRGDWTAHAERLARLTLEILKHWHGLQKRFKGKIDLAQAVALNDIKAQLGNLVYPGFVRE 1260
            KRG W  HAERLAR TLE+LK WHGLQKRFKGKIDL+QAVALNDIK QLGNLVYPGFVRE
Sbjct: 1142 KRGSWAEHAERLARQTLEVLKLWHGLQKRFKGKIDLSQAVALNDIKQQLGNLVYPGFVRE 1201

Query: 1261 TPAEWLKEYPRYLKAIEQRFEKIGAQLQRDRVWSGELAGYWEQYQTRLNKHLQEGKRDAE 1320
            TP  W KE PRYLKA+E R EK+G+Q+Q+DRVWSGELA  W QY+ R +KH QEGKRD +
Sbjct: 1202 TPGVWFKELPRYLKAVELRLEKLGSQVQKDRVWSGELANLWAQYKARADKHAQEGKRDEQ 1261

Query: 1321 LALYRWMLEEYRVSLWAQQLGTRMAVSDKRLNKQWSQVE 1359
            L +YRW LEEYRVSL+AQQLGT++ +SDKRL+KQWSQVE
Sbjct: 1262 LTVYRWWLEEYRVSLFAQQLGTKVPISDKRLSKQWSQVE 1300