Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  303 bits (777), Expect = 9e-87
 Identities = 196/556 (35%), Positives = 293/556 (52%), Gaps = 21/556 (3%)

Query: 13  LLALGPILLLAVVLSGVSVVQLKDLADQQEAQTRASLIRDRRAELKHYVELAKNAIGPIY 72
           LL   PI     ++  V+VV L  L      Q R+ L R ++   +H VE A        
Sbjct: 3   LLRNVPISKRLWLIPVVAVVMLFILGLLMIQQVRSDLYRGKQESTRHVVEAASGVFEHYR 62

Query: 73  ERSAEGDM---QARSQAVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERIGESFADYRD 129
           +    G M   +A+  A+     L Y  + Y+W  D     +      +  G+  +  +D
Sbjct: 63  KLELSGAMTTAEAQKAAIEQIRLLRYDGQDYYWINDLGPTMIMHPMQPKLDGQDLSKIKD 122

Query: 130 PNGVFAIRELVKAGQ-DSSHYVDYSFAVPGSNALVPKVGYAEYLPKWNLVFGTSLNLDDV 188
           P G     E+V+  Q D +  VDY +A PG    VPK+ Y +    W  + G+ + +DDV
Sbjct: 123 PEGKELFNEMVRIAQRDGAGLVDYMWAKPGEENPVPKISYVQLFKPWGWIIGSGIYVDDV 182

Query: 189 ERDVVEARAVFQARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQ 248
           E++       F   +   +LI     LL+  +MA L  ++  +I+RPL      + ++A 
Sbjct: 183 EQE-------FWNYLTRFSLI----GLLISAIMAVLVAILIRSIVRPLRHTMAAMANIAS 231

Query: 249 GDGDLTHRLPITSRDELGELSTSFNRFVEKIHALVRQV---AGTTTQLSGLVGAVASQAQ 305
           G+ DLT  L ++  DEL  L   FNRF +K+  +V Q+   AG   Q S  +  ++ QA 
Sbjct: 232 GEADLTRTLDVSGNDELTTLGRDFNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAH 291

Query: 306 RSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIR 365
              Q    Q  + +QVATAINE++ A  EVA +A+ A+      + Q    ++ ++ S++
Sbjct: 292 EQSQ---QQMLQMEQVATAINEVTYAVQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQ 348

Query: 366 QIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRG 425
           QI EL   +  + + ++ L  +   I  VL+VI +IAEQTNLLALNAAIEAARAGE GRG
Sbjct: 349 QIDELSATIGQAVDVIQSLADETTKIGSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRG 408

Query: 426 FAVVADEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGES 485
           FAVVADEVR LA RTQQST EI GMI+RLQ  +   V  ++ +    + T   A+QAGES
Sbjct: 409 FAVVADEVRLLAQRTQQSTAEIHGMIERLQKNSGAAVNVIMESNRASQLTVEQASQAGES 468

Query: 486 LDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTAREL 545
           L  I+  +  ++ +NA IA+A  +Q+ V E+IN++V   A         A Q ++  ++L
Sbjct: 469 LGEIAQALRNLSGLNASIASATLQQSHVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQL 528

Query: 546 NGLAEQLQRLVGQFRI 561
             LA QL RL+ QFR+
Sbjct: 529 GELAGQLNRLLSQFRV 544