Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 559 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  625 bits (1613), Expect = 0.0
 Identities = 331/557 (59%), Positives = 419/557 (75%)

Query: 5   LRLRAKLLLLALGPILLLAVVLSGVSVVQLKDLADQQEAQTRASLIRDRRAELKHYVELA 64
           L L+AK+L LA+ P+LL AVV+S  +V  L+  A  +  +TR  L+ D +A L+ YVE+A
Sbjct: 3   LSLKAKVLSLAVVPVLLFAVVISLTTVWILQGQARNEVEETRQRLLNDAKATLQSYVEVA 62

Query: 65  KNAIGPIYERSAEGDMQARSQAVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERIGESF 124
              I P+Y+ +A GD  AR++ V +     YG +GYF+GYD ++ R+F+G + + +G+SF
Sbjct: 63  MTTIKPLYDAAAPGDTAARTEVVKLLSNTRYGKDGYFFGYDSETIRLFKGNSPDGVGKSF 122

Query: 125 ADYRDPNGVFAIRELVKAGQDSSHYVDYSFAVPGSNALVPKVGYAEYLPKWNLVFGTSLN 184
            D RDPNGV+  R+LVK G+D +HY+ YS   PG   LVPK+GY EYLPKW++V GTS+N
Sbjct: 123 KDNRDPNGVYVNRDLVKVGKDGTHYLQYSSTQPGQTELVPKMGYTEYLPKWDMVIGTSVN 182

Query: 185 LDDVERDVVEARAVFQARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLD 244
           LD +E  V    A  + R++ + L +LG A+++L+++A + ++M+N ILRPL  +K NLD
Sbjct: 183 LDGIEAQVAVVEAKVEKRMEGVLLSILGVAVVVLLVIAAVGMVMANTILRPLHLMKANLD 242

Query: 245 DMAQGDGDLTHRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQA 304
           D+A G+GDLT RL ITS+DELG+L+ +FNRFV+KIH LVRQ+   TTQL+GLV  V+ QA
Sbjct: 243 DIAAGEGDLTRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTTQLTGLVSQVSDQA 302

Query: 305 QRSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSI 364
           QRSEQAM  QR ETDQVATAIN+MS+AA EVA SAQ A+ AA++TD +G AAK+VVD SI
Sbjct: 303 QRSEQAMERQRHETDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSI 362

Query: 365 RQIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGR 424
            QIH LV ++R SG SL+ LQQDV  IV VL VIR+IAEQTNLLALNAAIEAARAGEAGR
Sbjct: 363 AQIHALVNDIRSSGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGR 422

Query: 425 GFAVVADEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGE 484
           GFAVVADEVRALASRTQ ST EIQGMIDRLQ  T   V  M R+ + G+ T   AN+AG 
Sbjct: 423 GFAVVADEVRALASRTQTSTQEIQGMIDRLQKGTEAAVDAMRRSSDAGDGTSAKANEAGA 482

Query: 485 SLDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARE 544
           SLD ++ LIGTINSMNAQIA+AAEEQTAVAEEINRSVH IA AVD VA +   GAQT+R 
Sbjct: 483 SLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRS 542

Query: 545 LNGLAEQLQRLVGQFRI 561
           L  L ++L +LVGQFRI
Sbjct: 543 LADLGQRLGQLVGQFRI 559