Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 715 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  272 bits (696), Expect = 3e-77
 Identities = 162/381 (42%), Positives = 233/381 (61%), Gaps = 4/381 (1%)

Query: 185 LDDVERDVVEARAVFQARIDSL----TLIMLGSALLLLILMAGLAVLMSNAILRPLLQIK 240
           LD  E  +V      +A++D+     TL+ L   L+  ++   L  LM+ ++ RP+L + 
Sbjct: 335 LDVPENVLVAPAEALKAQLDADNAKGTLLELSLGLIAAVVGLILVWLMARSVTRPILGVA 394

Query: 241 QNLDDMAQGDGDLTHRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAV 300
             L+D+A G+GDLT RL    +DELG+L+  FNRF++K+  ++ +V  +     G     
Sbjct: 395 HMLEDIASGEGDLTRRLAYDKQDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQS 454

Query: 301 ASQAQRSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVV 360
           A+ A ++   M  Q  + DQVATA +EMSA A +VA SA +AA+AARE DQ       V+
Sbjct: 455 AAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAQAAREADQATRDGLTVI 514

Query: 361 DQSIRQIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAG 420
           D++   I  L  ++  +   +EGL  + + I  VL+VIR IAEQTNLLALNAAIEAARAG
Sbjct: 515 DRTTANIGHLAADMSTAMAQVEGLAANSEKIDSVLEVIRGIAEQTNLLALNAAIEAARAG 574

Query: 421 EAGRGFAVVADEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHAN 480
           EAGRGFAVVADEVR LA RTQ+S  E + +I++LQ+ T   VG M  +  + + +     
Sbjct: 575 EAGRGFAVVADEVRNLAQRTQESVEETRLVIEQLQSGTVDVVGAMGNSYRQAQGSVEQVG 634

Query: 481 QAGESLDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQ 540
           +A  +L  I   +  I+ MN QIA+AAEEQ+AVAEEIN +V  I D  + ++  A + A+
Sbjct: 635 EAVTALRQIGDAVTVISDMNLQIASAAEEQSAVAEEINSNVATIRDVTESLSEQANESAR 694

Query: 541 TARELNGLAEQLQRLVGQFRI 561
            ++ LN LA Q Q L+ QFR+
Sbjct: 695 VSQALNSLANQQQGLMDQFRV 715