Pairwise Alignments

Query, 562 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  249 bits (636), Expect = 2e-70
 Identities = 159/497 (31%), Positives = 250/497 (50%), Gaps = 25/497 (5%)

Query: 75  GDRIAIQMPNLLQYPIAVFGALRAGLIVVNTNPLYTSREMRHQFQDSGARALVYLNTFGH 134
           GDR+ I  PN  Q+ I    + + G I+VN NP Y   E+ +  + SG R LV    F  
Sbjct: 70  GDRVGIWSPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKT 129

Query: 135 N-----VQEVLPDTAIEHLIEVRIGDMLPPLKGVLVNAAVKHLKKMVPDYSLPQAISFKD 189
           +     VQE++P+ A     E+   + LP L+GV ++ A       +P ++  +      
Sbjct: 130 SDYHTMVQELVPELASAAPGELA-SECLPELRGV-ISLAANPPAGFLPWHAFAERAGQTS 187

Query: 190 VLRDGARHNHKPAPLELDHVAVLQYTGGTTGVAKGAMLTHGNLVANMQQVRANMQQLDEH 249
           V    AR       L+ D    +QYT GTTG  KGA L+H N++ N   V          
Sbjct: 188 VEACTARQQS----LQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMV---------- 233

Query: 250 GHPIIREGQEVMIAPLPLYHIYAFTVNCMCMVVTGNHNVLITNPRDINGFVKELQRWQFS 309
           G  +    ++ M+ P+PLYH +   +  +  +  G+  +   +  D    ++ +   + +
Sbjct: 234 GESLGLTARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERAT 293

Query: 310 AFLGLNTLFVALMAHPQFKKIDFSRLK-GTNSGGTALVSAVAERWKSMTGCTVVEGYGLT 368
              G+ T+F+A++ HP    +D S L+ G  +G T  +  +      M    V   YG+T
Sbjct: 294 ILYGVPTMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMT 353

Query: 369 ETSPV-VCANPHGE-HSRLGTVGLPVPGTTVKVIDDEGNALPLGERGELCVKGPQVMKGY 426
           ETSPV +   P  +   R+ TVG   P    K++D +G  +P GE GELC +G  VM GY
Sbjct: 354 ETSPVSLQTGPDDDLELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGY 413

Query: 427 WQRPDATAEVLDEEGWLKTGDIAVIDEDGFVSIVDRKKDLIIVSGFNVYPNEIEDVVMAH 486
           W  P ATA+ +D  GW+ +GD+AV+DE G+V IV R KD+II  G N+YP E+E+    H
Sbjct: 414 WDNPQATADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTH 473

Query: 487 PKVAACAAIGVADEKSGEAVKLFV-VPSDPTLDQDELHAYCRENFTGYKMPRHYVFRDAL 545
           P VA    IG+   + GE +  ++ +    +   +EL  +C+     +K+PR+  F D  
Sbjct: 474 PAVADAQVIGIPCSRYGEEIVAWIKLHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEY 533

Query: 546 PMTPVGKILRRELRDIA 562
           PMT  GK+ +  +R+I+
Sbjct: 534 PMTVTGKVQKFRMREIS 550