Pairwise Alignments

Query, 255 a.a., ABC-type branched-chain amino acid transport systems, ATPase component from Pseudomonas stutzeri RCH2

Subject, 274 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  210 bits (534), Expect = 3e-59
 Identities = 110/258 (42%), Positives = 163/258 (63%), Gaps = 5/258 (1%)

Query: 2   SRPILEVRGLMMRFGGLLAVNEVGLTVHDKQVVSMIGPNGAGKTTVFNCLTGFYQPTAGE 61
           S  IL V  + M+FGGL A+ ++   VH+ +++S+IGPNGAGKTT FN +TGF +PT G 
Sbjct: 6   SSAILNVEHVGMKFGGLTAIADLHFDVHEGEILSLIGPNGAGKTTAFNIMTGFLKPTQGR 65

Query: 62  ILLDGTPIHGLPGHKIARQGVVRTFQNVRLFKDMTAVENLLVAQHRHLN----TNFLAGL 117
           +L  G  +     ++IAR G+ RTFQ   +F D +  +N+L+  HR  +    T  L  L
Sbjct: 66  VLFRGRDLSQTRPNEIARLGLARTFQRTSVFADDSVRDNVLIGLHRFGDDTRATALLDRL 125

Query: 118 LKTPGFRKSERAAMDFAAHWLEQVNLTDVANRPAGTLAYGQQRRLEIARCMMTRPRILML 177
             TP  R++E A  + A   ++ V L+  A   AG+L+YG+QR +  A  +   P++L+L
Sbjct: 126 FPTPAARRAENAVRERAEAIIDMVGLSARAGDKAGSLSYGEQRLVGFALALAVEPKMLLL 185

Query: 178 DEPAAGLNPKETEDLKALIAMLRDEHGVTVLLIEHDMKLVMSISDHIYVINQGTPLADGS 237
           DEP +G+N  ET+    LI  +RDE GVT+LL+EHDM +VM +SD I  +N G  +A+G 
Sbjct: 186 DEPVSGMNASETQGFVRLIRKVRDE-GVTILLVEHDMPMVMEVSDRIVCLNYGRLIAEGP 244

Query: 238 PEQVRNNPDVIKAYLGEA 255
           PE +R +P VI+AYLG++
Sbjct: 245 PEAIRTDPKVIEAYLGKS 262