Pairwise Alignments

Query, 671 a.a., excinuclease ABC, B subunit from Pseudomonas stutzeri RCH2

Subject, 674 a.a., excinuclease ABC subunit UvrB from Rhodanobacter sp000427505 FW510-R12

 Score =  918 bits (2372), Expect = 0.0
 Identities = 464/673 (68%), Positives = 560/673 (83%), Gaps = 7/673 (1%)

Query: 3   KFELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVQRPTLVL 62
           +F+LV  ++PAGDQP+AI ++ +G EAGL+ QTLLGVTGSGKT++IAN+I  VQRPT+V+
Sbjct: 4   RFQLVAPYQPAGDQPQAIARLADGFEAGLAAQTLLGVTGSGKTYTIANMIERVQRPTIVM 63

Query: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122
           APNKTLAAQLYGEF+ FFP+NAVEYFVSYYDYYQPEAYV +SDTFIEKD+SIN+HIEQMR
Sbjct: 64  APNKTLAAQLYGEFREFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDSSINEHIEQMR 123

Query: 123 LSATKALLERPDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLTGLQYTR 182
           LSATKALL R D+IIV TVS IYGLG+P+ YL + L +  G+R+DQR+L+ +LT LQYTR
Sbjct: 124 LSATKALLSRRDSIIVATVSAIYGLGNPEDYLSLRLILATGERIDQRKLIHQLTELQYTR 183

Query: 183 NDMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPRFTF 242
           N+ +  R T+RVRG+++D+FPAES+ EA+RIELFD EVE ++ FDPLTGE IRK+ R+T 
Sbjct: 184 NETELRRGTYRVRGEIVDVFPAESETEALRIELFDGEVEKMALFDPLTGETIRKVQRYTV 243

Query: 243 YPKSHYVTPRETLLDAIEKIKDELRERLDYLRSQNKLVEAQRLEQRTRFDLEMIMELGYC 302
           YP++HY + RE++L+AIE IK EL++RL+YL  +NKLVEAQRLEQRTRFDLEM+ E+GYC
Sbjct: 244 YPRTHYASTRESVLNAIETIKLELKDRLEYLYKENKLVEAQRLEQRTRFDLEMMAEVGYC 303

Query: 303 NGIENYSRYLSGRDAGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362
            GIENYSR+L+ R  GEPPPTLFDYLPAD LLV+DESHV+VPQ+GAMYKGDRSRKETLVE
Sbjct: 304 QGIENYSRHLTRRAPGEPPPTLFDYLPADGLLVVDESHVTVPQLGAMYKGDRSRKETLVE 363

Query: 363 YGFRLPSALDNRPMRFDEWEAICPQTIFVSATPGPYEAEHAG-RVVEQVVRPTGLVDPQI 421
           +GFRLPSA+DNRP+RF+EWE   P+ I+VSATP  YE   +G  V E VVRPTGLVDP++
Sbjct: 364 FGFRLPSAMDNRPLRFEEWEERVPRAIYVSATPRDYELHKSGDAVTELVVRPTGLVDPEV 423

Query: 422 EVRPALTQVDDLLSEIRKCVVKEERVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSDIDTV 481
           EVRP  TQVDDLLSE+ K V   +RVLVTTLTKRMAE+LT+YL++HDV+VRYLHSDI+TV
Sbjct: 424 EVRPVRTQVDDLLSEVHKRVALGDRVLVTTLTKRMAENLTEYLAEHDVKVRYLHSDIETV 483

Query: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541
           ER EIIRDLRLG FDVLVGINLLREGLDMPEVSLVA+LDADKEGFLRS  SLIQTIGRAA
Sbjct: 484 ERSEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAVLDADKEGFLRSTGSLIQTIGRAA 543

Query: 542 RNLNGRAILYADNVTGSMQRAMDETERRRNKQIAFNEANGIVPKGVTKDVRDILEGA-TV 600
           RN+ G+AILYADNVT SMQ AMDET RRR KQ+ FNEA+GI PK V + + DI+EGA + 
Sbjct: 544 RNVRGKAILYADNVTRSMQAAMDETARRREKQVVFNEAHGITPKTVVRRIADIMEGARSE 603

Query: 601 PGSR---SKKRRGEAKAAEESARYENELRSPSEITKRIRQLEEKMLSLARDLEFEAAAEA 657
            G+R       RG A  AE +A Y     SP +    IR+LE +M   A++LEFE AA  
Sbjct: 604 AGNRRGGKSSTRGRAAVAEPAAEYAG--LSPQQAAGAIRKLEAQMYKHAQNLEFEDAARL 661

Query: 658 RDEIHKLRERLLQ 670
           RD+IH+LRE+ L+
Sbjct: 662 RDQIHQLREQALR 674