Pairwise Alignments

Query, 671 a.a., excinuclease ABC, B subunit from Pseudomonas stutzeri RCH2

Subject, 702 a.a., excinuclease ABC subunit UvrB from Magnetospirillum magneticum AMB-1

 Score =  783 bits (2023), Expect = 0.0
 Identities = 390/663 (58%), Positives = 501/663 (75%), Gaps = 11/663 (1%)

Query: 3   KFELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVQRPTLVL 62
           +F++V+ ++PAGDQP+AI ++  G++A    Q LLGVTGSGKTF++A+VIA  +RP LVL
Sbjct: 21  EFKIVSDYQPAGDQPQAIAELSAGVDADERDQVLLGVTGSGKTFTMAHVIARTRRPALVL 80

Query: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122
           APNKTLAAQLY E K FFP+NAVEYFVSYYDYYQPEAY+P +DT+IEKD+++N+ I++MR
Sbjct: 81  APNKTLAAQLYAEMKGFFPDNAVEYFVSYYDYYQPEAYIPRTDTYIEKDSAVNEQIDRMR 140

Query: 123 LSATKALLERPDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLTGLQYTR 182
            +AT+ALLER D I+V +VSCIYG+G  +SY +M + +  G+ +D+ +LL+RL  LQYTR
Sbjct: 141 HAATRALLERRDVILVASVSCIYGIGSVESYARMTVALKVGESIDRSDLLKRLVELQYTR 200

Query: 183 NDMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPRFTF 242
           ND  F R TFRVRGD ++IFP   +  A R+ LF DE+E+++ FDPLTGE    L   T 
Sbjct: 201 NDAAFERGTFRVRGDAVEIFPVHYEDRAWRLSLFGDEIEAINEFDPLTGEKTCSLSEVTV 260

Query: 243 YPKSHYVTPRETLLDAIEKIKDELRERLDYLRSQNKLVEAQRLEQRTRFDLEMIMELGYC 302
           YP SHYVTPR T+  AI+ IK EL+E L+   ++ KL+EAQRLEQRT FDLEM+   G+C
Sbjct: 261 YPSSHYVTPRPTITQAIKGIKAELKETLERFHAEGKLLEAQRLEQRTNFDLEMLETTGHC 320

Query: 303 NGIENYSRYLSGRDAGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362
             IENYSRYL+GR  G+PPPTLF+YLP DALL++DESHV+VPQ+G MY+GD +RK  L E
Sbjct: 321 KSIENYSRYLTGRRPGDPPPTLFEYLPEDALLIVDESHVTVPQIGGMYRGDFNRKSVLAE 380

Query: 363 YGFRLPSALDNRPMRFDEWEAICPQTIFVSATPGPYEAEHAGRV-VEQVVRPTGLVDPQI 421
           +GFRLPS +DNRP++F+EWE + PQT++VSATPGP+E E  G V  EQV+RPTGL+DP  
Sbjct: 381 FGFRLPSCIDNRPLKFEEWELMRPQTVYVSATPGPWEMERTGGVFTEQVIRPTGLIDPVC 440

Query: 422 EVRPALTQVDDLLSEIRKCVVKEERVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSDIDTV 481
            VRP   QVDDLL E+R+      R LVTTLTKRMAEDLT+Y+ D+ VRVRYLHSDIDT+
Sbjct: 441 IVRPVEHQVDDLLGEVRQMARLGNRTLVTTLTKRMAEDLTEYMHDNGVRVRYLHSDIDTL 500

Query: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541
           ER+EIIRDLRLG FDVL+GINLLREGLD+PE +LVAILDADKEGFLRS+ SLIQTIGRAA
Sbjct: 501 ERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSKTSLIQTIGRAA 560

Query: 542 RNLNGRAILYADNVTGSMQRAMDETERRRNKQIAFNEANGIVPKGVTKDVRDILEGATVP 601
           RN++GR ILYAD +T S+  A+ ET RRR KQ A+N  +GI P+G+ K V D+++ +   
Sbjct: 561 RNIDGRVILYADKMTASLDYALAETNRRREKQQAYNALHGITPEGIRKAVSDVMD-SVYE 619

Query: 602 GSRSKKRRGEAKAAEESARYENELRSPSEITKRIRQLEEKMLSLARDLEFEAAAEARDEI 661
                   G++  A         +++          +E++M + A DLEFE AA  RDE+
Sbjct: 620 ADYVTVGTGDSGLAHGVGHNLASVKA---------DIEKRMKAAAADLEFEEAARLRDEL 670

Query: 662 HKL 664
            +L
Sbjct: 671 RRL 673