Pairwise Alignments

Query, 863 a.a., type VI secretion ATPase, ClpV1 family from Pseudomonas stutzeri RCH2

Subject, 679 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Sphingobium sp. HT1-2

 Score =  501 bits (1290), Expect = e-146
 Identities = 283/651 (43%), Positives = 406/651 (62%), Gaps = 19/651 (2%)

Query: 196 IDILARRRKNNPIVVGEAGVGKTAIVEGLALRIASGEVPATLKGVELLCLDLGLLQAGAS 255
           + ILARR KNNP ++GE GVGKTAI EGLALRIA+G+VP +L+   L+ LD+G L AGA 
Sbjct: 1   VQILARRTKNNPALMGEPGVGKTAIAEGLALRIANGDVPESLRDRRLMALDMGSLIAGAK 60

Query: 256 VKGEFERRLQGVIDEVKASPKPIILFIDEAHTLIGAGGQAGSGDAANLLKPALARGELRT 315
            +GEFE RL+ V+DEVK +   IILFIDE HTLIGAG   G+ DA+NLLKPALARGEL  
Sbjct: 61  YRGEFEERLKSVLDEVKGAEGDIILFIDEMHTLIGAGKGEGAMDASNLLKPALARGELHC 120

Query: 316 IAATTWSEYKKYFEKDPALARRFQPVQLHEPSVQEAVTILRGLAPVYEKSHGIYLRDDAV 375
           I ATT  EY+KY EKDPAL RRFQPV + EP+V++ ++ILRG+   YE  HG+ + D+A+
Sbjct: 121 IGATTLDEYQKYVEKDPALQRRFQPVFVGEPTVEDTISILRGIKENYELHHGVRIADNAI 180

Query: 376 AAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPEALERLRGEVAEGERQREAMR 435
            AAA LS RY+A R LPDKA+D++D A +R+R+ + + PE +E L   + + + + +A+ 
Sbjct: 181 VAAATLSNRYIADRFLPDKAIDLMDEAASRIRMEVESKPEEIEGLDRRIIQLKIEEQALA 240

Query: 436 RDLAVGLPVDAAALERLE---QRLIAAGDEIEQLETRWAKQRLLAERLLDLRKRTAEAR- 491
           ++       D A+ +RLE   + L     +  +L TRW  +R        ++++   AR 
Sbjct: 241 KE------TDQASRDRLEALREDLANLEQQSAELTTRWQNERDKIASEGKIKEQLDAARV 294

Query: 492 --SAANEDGEVPSLDELE-TELRAVQAEL--AAAQAKQRLVSHEVCPRLVAEVISHWTGV 546
               A   G+     EL  + + A++  L  A  Q+   L+  EV    +A V+S WTG+
Sbjct: 295 ELEQAQRAGDYAKAGELTYSRIPALEKSLEDAQGQSNNALLREEVTSEDIAAVVSRWTGI 354

Query: 547 PLAQLAREHNAQVANFAADLRARVRGQEQAVEALDRAMRAAAAGLNKPDAPVGVFLLVGP 606
           P+ ++      ++      +  RV GQ+ AV A+ +A+R A AGL  P+ P+G FL +GP
Sbjct: 355 PVDRMMEGERDKLLKMEEVIGKRVIGQKDAVLAVSKAVRRARAGLQDPNRPLGSFLFLGP 414

Query: 607 SGVGKTETALALADLLYGGERFLTVINMSEFQEKHSVSRLIGAPPGYVGYGEGGMLTEAV 666
           +GVGKTE   ALA  L+  +  +  I+MSEF EKHSVSRLIGAPPGYVGY EGG+LTEAV
Sbjct: 415 TGVGKTELTKALAGFLFDDDAAMVRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGVLTEAV 474

Query: 667 RQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMTSNLASERIA 726
           R++PY V+L DEVEKA  DV NV  Q+ D G   DG+GR ++F NTLI++TSNL S+ +A
Sbjct: 475 RRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRVVDFTNTLIILTSNLGSQFLA 534

Query: 727 SFCTAGQRPTAEDLELAIRPQLSQHFKPALLGRM-RVVPYYPIAGAVLDELVALKLVRFG 785
           +    G     E +E  +   +  HF+P  L R+  ++ ++ +    +  +V +++ R G
Sbjct: 535 NL---GDGEDVEKVEPQVMDVVRGHFRPEFLNRLDEIILFHRLGQEHMGPIVEIQVARVG 591

Query: 786 ERLQRRQLQFSHCPALVTHLSERCDDSDSGARLIDHLIEQHLQPLVVDRLL 836
           + L+ R++      A    L     D   GAR +   ++++LQ  + ++LL
Sbjct: 592 KLLKDRKITLDLTEAAERWLGRIAYDPVYGARPLKRAVQRYLQDPLAEKLL 642