Pairwise Alignments

Query, 863 a.a., type VI secretion ATPase, ClpV1 family from Pseudomonas stutzeri RCH2

Subject, 878 a.a., Protein ClpV1 from Pseudomonas putida KT2440

 Score =  734 bits (1894), Expect = 0.0
 Identities = 427/875 (48%), Positives = 563/875 (64%), Gaps = 39/875 (4%)

Query: 4   VDLQQLVQALDAETKRDLEGAAERCVVRGGSKILVEDLLLGLLERSDGLLKRALLDAEVD 63
           V+L+ L   L+  ++   E AA  C+     ++ VE LLL LL+ +D  L   L   +V 
Sbjct: 14  VNLKSLFAKLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVV 73

Query: 64  AGAL-AQALQPRG--EHSESRNPVFSTELVQWLQDALLVASLELGQSQIDQAALILALLR 120
           A  L AQ +   G  +   +R P  S  + + ++ A L+AS+E G  Q+  A L+ ALL 
Sbjct: 74  AERLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLD 133

Query: 121 NP-LRYAGSHYQPLLARLDAERLR--------DFALSQQPQG--------STGKPAAGGE 163
           +  LR       P L +++A+ LR          A S+Q           ST   A+G  
Sbjct: 134 DAELRRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKT 193

Query: 164 SNLARFTHNFTQQARDGKLDPVLCRDSAIRQMIDILARRRKNNPIVVGEAGVGKTAIVEG 223
             L ++T N TQ AR+G++DPVL R+  +RQM+DIL RRR+NNPI+ GEAGVGKTA+VEG
Sbjct: 194 PALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG 253

Query: 224 LALRIASGEVPATLKGVELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPKPIILFID 283
           LALRIA G+VPA LK V L  LDLGLLQAGA VKGEFE RL+ VI+EVK S  PIILFID
Sbjct: 254 LALRIAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFID 313

Query: 284 EAHTLIGAGGQAGSGDAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQL 343
           EAHTLIG+GGQAG  DAANLLKPALARGELRTIAATTW+EYKKYFEKD ALARRFQ V++
Sbjct: 314 EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKV 373

Query: 344 HEPSVQEAVTILRGLAPVYEKSHGIYLRDDAVAAAAELSARYLAGRQLPDKAVDVLDTAC 403
            EP   +A+ +LRGL     + H + + D+A+  A  LS RY+ GRQLPDKAV VLDTAC
Sbjct: 374 EEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTAC 433

Query: 404 ARVRISLAAAPEALERLRGEVAEGERQREAMRRDLAVGLPVDAAALERLEQRLIAAGDEI 463
           AR+ ++ ++ P ALE  R ++   + + + +  +   G    A  LE L+  L A   + 
Sbjct: 434 ARIALAQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHD-HARRLESLQAALQAEQQQE 492

Query: 464 EQLETRWAKQRLLAERLLDLRKRTAEARSAANEDGEVPSLDELETELRAVQAELAAAQAK 523
           +QL  +W ++  L E+L        +A  AAN        D    +L  ++AELA  Q  
Sbjct: 493 QQLNAQWQQELELVEQL--------KALDAAN--------DADAQQLNTLRAELARVQGD 536

Query: 524 QRLVSHEVCPRLVAEVISHWTGVPLAQLAREHNAQVANFAADLRARVRGQEQAVEALDRA 583
           Q LV   V    +A+VIS WTG+PL ++ R+    V    A L  RV GQ+ A+  + + 
Sbjct: 537 QPLVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKR 596

Query: 584 MRAAAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEKHSV 643
           ++ + A +  P+ P+GVFLL+GPSGVGKTETALALAD LYGGER L  INMSE+QE H+V
Sbjct: 597 IKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTV 656

Query: 644 SRLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGE 703
           S L G+PPGYVGYGEGG+LTEAVR+KPYSV+LLDEVEKA PDV+ +F+Q+FDKGV +DGE
Sbjct: 657 SSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGE 716

Query: 704 GREINFRNTLILMTSNLASERIASFC-TAGQRPTAEDLELAIRPQLSQHFKPALLGRMRV 762
           GREINFRNT+I++TSN  +ERI   C  A + PT E +   +R QL+  FKPA LGR+ +
Sbjct: 717 GREINFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRLSI 776

Query: 763 VPYYPIAGAVLDELVALKLVRFGERLQR-RQLQFSHCPALVTHLSERCDDSDSGARLIDH 821
           VP+YP+   +L+ +VALKL R  +R  R  Q + S+  ALV  ++ RC + DSGAR ID+
Sbjct: 777 VPFYPVQDQILERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARNIDN 836

Query: 822 LIEQHLQPLVVDRLLDAMASGEPLQQVHATLNGDG 856
           ++ Q L P +  R+L+ MA   P+Q +   L  DG
Sbjct: 837 ILSQTLMPELAQRVLERMAQDAPIQHLAIELGSDG 871