Pairwise Alignments

Query, 505 a.a., Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains from Pseudomonas stutzeri RCH2

Subject, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

 Score =  253 bits (646), Expect = 1e-71
 Identities = 163/412 (39%), Positives = 231/412 (56%), Gaps = 30/412 (7%)

Query: 118 PDSPKPWRSLLCLPLQDEQQRVAGLLLTAST----ESRELHGFSGSLSQLGAFGLTQLHL 173
           PD+       +  PL  +++    + L A T    +S EL     + + L A  +T    
Sbjct: 107 PDADLEVHDCMGCPLMVDERPWGLVTLDALTPGQFQSLELDALQ-AFASLAAATVTVAER 165

Query: 174 LQRLRAPGSTTPPAAPVSPCASGYG--LIGDSPRMRAVYQLIGKVLHSPVNVLLTGETGT 231
           ++ L          A +   ASG    LIG SP  + + + I  V  S + VL+TGETG 
Sbjct: 166 IEHLALRAEDEHHRAELYRQASGQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGV 225

Query: 232 GKELVARAIHDCGFRRSKPFVVQNCASLPEQLLESELFGYRKGAFTGADRDRSGLLDAAN 291
           GKELVA+A+H    R  KP V  NCA+LP+ L+ESELFG+ +GAFTGA  +R G  + AN
Sbjct: 226 GKELVAQALHRASSRADKPLVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELAN 285

Query: 292 GGTLFLDEIGDMPLLLQAKLLRVLQEGEVRPLGSTETHKVDVRIVAATHRDLRSQVENGL 351
           GGTLFLDE+G++PL +QAKLLRVLQ G+++ LGS   H+VDVR++AAT+RDL ++V  G 
Sbjct: 286 GGTLFLDEVGELPLTVQAKLLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGN 345

Query: 352 FREDLFYRLSHFPIELPPLRERDEDILRLARHFADKACAFLQRDLCRWSDAALERLAGYA 411
           FR D ++RLS +P+ +PPLRER  D+L LA +F ++  + L  +  R S  A   L  Y 
Sbjct: 346 FRADFYHRLSVYPLHVPPLRERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYD 405

Query: 412 FPGNVRELKGLVERAVLLCEGGE--------LLPEHLNLHVEASLDSSL----------- 452
           +PGNVREL+ L+ R+ L   G          L    L+L V A+   +L           
Sbjct: 406 WPGNVRELEHLIGRSALKALGQHPDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVT 465

Query: 453 ----NLRERMERVERSLLMDCLRKNGGNQSQAARELGLPRRTLLYRMERLNI 500
                LRE ++  +R ++  CL+++  N + AARELGL R  L     RL +
Sbjct: 466 PPEGGLREAVDSYQRQVIEACLQRHQDNWAAAARELGLDRANLSRLARRLGL 517