Pairwise Alignments

Query, 303 a.a., protein-export membrane protein, SecD/SecF family from Pseudomonas stutzeri RCH2

Subject, 319 a.a., Protein translocase subunit SecF from Variovorax sp. SCN45

 Score =  234 bits (596), Expect = 3e-66
 Identities = 131/307 (42%), Positives = 191/307 (62%), Gaps = 18/307 (5%)

Query: 4   VINFMGVRHVAFALTVLLTVASLASLVVKGLNFGLDFTGGTLIELGYERPVELEQVRGQL 63
           V+N + V  V FAL V         L  +GL+  ++FTGGT+IE+ YE+  ++ +VR  +
Sbjct: 18  VLNIVSV--VTFALAVFF-------LFHRGLHLSVEFTGGTVIEVAYEQSADIGKVRDAV 68

Query: 64  VQAGFADAVVQSFGATTDVLVRMPGD----DPQLGERVASALRNADSGNSVSVKRVEFVG 119
            + G+ +  VQ++G + DV +R+P        Q   +V  AL++ D   S + + +E VG
Sbjct: 69  TKLGYPEVQVQNYGTSRDVQIRLPAQKGMSSDQQSAQVMQALKSVDP--SATQRGIEVVG 126

Query: 120 PAVGEELRDQGGLGMLLALGGILVYVAFRFQWKFGLGAVLSLFHDVILVLGVFSFFQISF 179
           P VGEEL   G   + + + GI++Y+AFRF+WKF L  VL+  HDV+++LG F+FFQ  F
Sbjct: 127 PQVGEELTTNGLKALGMVVVGIMIYLAFRFEWKFALATVLANLHDVVIILGFFAFFQWEF 186

Query: 180 DLTVLAAVLAVIGYSLNDTIVIFDRIRENFRMLRKAELLENINISTTQTLLRTVATSVST 239
            L VLAAVLAV+GYS+N+++VIFDRIRENFR  RK    E I+ + T T+ RT+ T  ST
Sbjct: 187 SLAVLAAVLAVLGYSVNESVVIFDRIRENFRRYRKMTTTEIIDNAITSTISRTIITHGST 246

Query: 240 LLAVGALMVFGGENLWGFSLALLIGVGAGTYSSVYVAGMLLVWLKLTRDDLI---PPVVE 296
            L V ++  FGG  L  F+LAL IG+  G YSS +VA  + +WL + R+DL+   PP  +
Sbjct: 247 QLVVLSMFFFGGPTLHYFALALTIGICFGIYSSCFVAAAIAMWLGIKREDLVKGGPPKRD 306

Query: 297 EEVDERP 303
            E  + P
Sbjct: 307 GESGDDP 313