Pairwise Alignments

Query, 303 a.a., protein-export membrane protein, SecD/SecF family from Pseudomonas stutzeri RCH2

Subject, 323 a.a., Protein translocase subunit SecF from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  272 bits (696), Expect = 7e-78
 Identities = 138/306 (45%), Positives = 211/306 (68%), Gaps = 4/306 (1%)

Query: 2   KRVINFMGVRHVAFALTVLLTVASLASLVVKGLNFGLDFTGGTLIELGYERPVELEQVRG 61
           ++V +FM   + AF ++ LL +A++  + V+G N+GLDFTGGT+IE+  E+P E++ +R 
Sbjct: 14  RKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEIDVMRD 73

Query: 62  QLVQAGFADAVVQSFGATTDVLVRMPGDDPQLGERVASA----LRNADSGNSVSVKRVEF 117
            L +AGF + ++Q+FG++ D++VRMP  + + G +V  +    + N  +  + +VKR+EF
Sbjct: 74  ALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINESTNQNAAVKRIEF 133

Query: 118 VGPAVGEELRDQGGLGMLLALGGILVYVAFRFQWKFGLGAVLSLFHDVILVLGVFSFFQI 177
           VGP+VG +L   G + ++ AL  ILVYV FRF+W+   G V++L HDVI+ LG+ S F I
Sbjct: 134 VGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHI 193

Query: 178 SFDLTVLAAVLAVIGYSLNDTIVIFDRIRENFRMLRKAELLENINISTTQTLLRTVATSV 237
             DLT++A++++VIGYSLND+IV+ DRIRENFR +R+    E  N+S TQTL RT+ TS 
Sbjct: 194 EIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSG 253

Query: 238 STLLAVGALMVFGGENLWGFSLALLIGVGAGTYSSVYVAGMLLVWLKLTRDDLIPPVVEE 297
           +TL+ +  L +FGG  L GFSL +LIGV  GT SS+YVA  L + L + R+ ++   VE+
Sbjct: 254 TTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEK 313

Query: 298 EVDERP 303
           E  ++P
Sbjct: 314 EGADQP 319