Pairwise Alignments

Query, 873 a.a., ATP-dependent transcriptional regulator from Pseudomonas stutzeri RCH2

Subject, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

 Score =  431 bits (1108), Expect = e-124
 Identities = 309/885 (34%), Positives = 447/885 (50%), Gaps = 40/885 (4%)

Query: 24  PRLPPLHVGRPRLVQAL-LDTDCRLRLICAPAGFGKSVLMSECARLVPPGTCLVWLDLGG 82
           P LP  HV R RL Q L      RL L+ APAGFGKS L  E    +P     +WL L  
Sbjct: 25  PPLPDGHVPRLRLCQRLEAGLGGRLLLVNAPAGFGKSSLAIEFCETLPEHWRSLWLGLSQ 84

Query: 83  RMCTVHALYEQL-------CTALG-------------EPACKETGTES--DMLTLLRGVG 120
           R        E+L       C ALG             +P   E   +   D L L     
Sbjct: 85  RDADPGRFLERLLEGLQQYCPALGGQAMGLLKMRQRHQPFAFEEWLDGLLDELALYLQAD 144

Query: 121 QPLWIMLDDYPRDDCPELDACLDMLLDMGPAPVSWWVSSRRQPAWKLPRLLLQGHLFELE 180
            PL ++LDDY     P LD CL   L+  P  +   V+SR++P W L RL L   L EL 
Sbjct: 145 TPLLLVLDDYHLAQGPVLDRCLQFFLNHLPPGLVLLVTSRQRPGWHLARLRLSRQLVELN 204

Query: 181 AEALAFTAEELDQILRVHRLTLSPESFQQLQRGMEGWPAGVCLMLL----NADEQALRER 236
            + L  TA+E   ++      L  ++   L +  +GW AG+    L    +ADEQAL + 
Sbjct: 205 EQDLRLTADESLAVIGRQPTGLRGQALDNLIQRSDGWVAGLRFWQLAASDSADEQALPQA 264

Query: 237 LVAGTPLLRDYVQREVMAGLTDEVRRALLALARMPRFSAALCDHVLDGIGRE----IVDV 292
           L  G  L+RDY+  EV+  L  +V+  L   A   RF A LCD +    GR     ++  
Sbjct: 265 LHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQERFCAPLCDAMR---GRHDSAAVLSF 321

Query: 293 LKTRQLFIRQIDNCGEWFRLWKPLAQMLQRSGENTVPTQVHLRACQWFASRGEMREAVEH 352
           L+  Q+F+  +D  G WFR     + +L+    +     +HLRAC+WF ++  + EAVE 
Sbjct: 322 LQAHQVFLVPLDEHGHWFRYHHLFSDLLRSRQASESQVALHLRACRWFEAQDLLDEAVEQ 381

Query: 353 ALWAGQPEVAANYLQRYGQEQLLIGDNVSRFLKWRSELPQDLFASTTRLIVLQGWALIIS 412
           AL AG  +VAA+ +Q   +EQLL   NV   L+W+ +LP  L  ST RLIVL  WAL ++
Sbjct: 382 ALRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLA 441

Query: 413 ARLDEVDDCLAELAKFFPQPDARRQAQLLAQWQALRGFLARLRGEPE-ARQNCLQALEVL 471
            +LD  ++    L++F P P A  Q  +LAQW AL G +AR RG+ E     C +AL+ L
Sbjct: 442 CQLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALSGVIARGRGDRERTLAYCGEALQSL 501

Query: 472 SDHAWAQRVLCYQVLTQQAMAEGELELAQQYNSEGMKLARLKGSVLYEVMLSVDRIQLLE 531
               + QR++C   L+  A+A+G+   A+ +N E ++LA+  G+ L+E +   DR ++L 
Sbjct: 502 PSKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRVGNPLFEALAHYDRARVLH 561

Query: 532 LTGEFERAVGVLNEALQALR--ESVRHSPLIGRLQLLQGHLLAYQGLDEPAQEAYQLGKA 589
             GE  RA+  + + LQ L+   + R   +  RL L +G+LL  +      +   + G  
Sbjct: 562 ARGEVLRALDEVRQGLQRLQGLSAQRLYAVRARLTLYEGYLLVSRLQPAQGRARLRAGLG 621

Query: 590 ETETCGDSYCFFGYVGLAELAARNHEFACAYHWLRDAERLSQWRHVPEARFRGILPLING 649
           E   C D     G+  +A L  R   FA A+  L +AERL     VP   +  ++ L+  
Sbjct: 622 EARACRDISVLIGHCVIATLDGREGHFAEAFAELAEAERLMHIWDVPPVYYLAMITLVKC 681

Query: 650 VAWLHQGELRKARSALCQVLELYEGQGYLSPSGFYELLP-RVRRYLAVIDVLDGQPARAI 708
             WL QG    A S L ++ + Y G+   +   F+ LLP  +    A +D +  +   A+
Sbjct: 682 ELWLAQGRTDLAESWLQRLGQTYGGEQPAAAPEFHPLLPLHIALQQAALDRIQLRSDDAV 741

Query: 709 AALREQVEQNLQAQRLGLACECRFSLAEALHADGQAVEAELEVRLALGEAARQHLVKPLY 768
             L   V++   +  + L           L  +G+  +A  ++  +L EAA   +++P+ 
Sbjct: 742 QRLACLVKRGQASGGMMLTVSALSQWLALLLDEGKEGQA-AQLLPSLLEAAHGGVMQPMQ 800

Query: 769 ELHHRQPQWLAAMLPALRGESLRQRLLRYEREPEVVLPAPDETVLSNRELTVLRLIAQGC 828
            L  + PQWL   L A     ++  LL++   P  +    +   LS RE+ VL LIAQGC
Sbjct: 801 PLLEKHPQWLQEQLQAGAACPVQAELLKH-LPPVPIASTGNGEALSGREMAVLELIAQGC 859

Query: 829 SNQEIAEQLFISLHTVKTHARRINTKLGVARRTQAVAKAKALAWL 873
           SNQ+I+E+LFISLHTVKTHA  IN+KLGV RRTQAVAKAK+L  L
Sbjct: 860 SNQQISERLFISLHTVKTHASHINSKLGVERRTQAVAKAKSLGLL 904