Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 418 a.a., Integrase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  191 bits (486), Expect = 3e-53
 Identities = 136/404 (33%), Positives = 198/404 (49%), Gaps = 23/404 (5%)

Query: 5   LLTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQ--V 62
           +LTD  +K++KP    +K++D  G+++ V P G   +R+ YR+ G+     IG +    +
Sbjct: 1   MLTDTALKNLKPKAAPYKVTDRDGMYVTVSPVGTVTFRYDYRMNGRRETLTIGRYGADGL 60

Query: 63  SLAEARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIK 122
           SLA AR     AR  V  G  PA E+Q+ K+R    L+E K  QE +      A +A+  
Sbjct: 61  SLARARERCIDARRAVSDGKSPAQEKQREKRR----LSEAKNFQEFTDRWAKGARMAD-- 114

Query: 123 PVFAHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAWA-AIHVKGDLS 181
                S+   ++S + + + P F    +++I    +R L  + K  GA A A+HV+  + 
Sbjct: 115 -----STRSMRKSILDRDILPAFKNRLLTEITSDDLRDLCNKVKGRGAPATAVHVRDIVK 169

Query: 182 AIFEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYRGYPETALCL 241
            I+ FA++ G   ANP   +             A++  +I+  +Q L     YP   L L
Sbjct: 170 QIYGFAILHGEKVANPADDVGPSSIATFVPKDRALSPVEIRLMHQQLETVASYPTIRLAL 229

Query: 242 RLIALTACRPGEAADAEWEEFDFEDAVWRRPAAKMKARREHVSPLSAQAIAVLKDLQRIT 301
           RLI LT  R GE   A W E DFE+A+W  P  +MK  + H   LS QA+ ++  L+   
Sbjct: 230 RLILLTLVRKGELIHATWNEIDFENALWTIPKERMKGSKAHNVYLSQQALDIMVALRTCA 289

Query: 302 GGGRYLFPHR----SGKGFTTPNRLT--YAMRDMNLG---RGTTPHCWRTTFSTWANENG 352
           GG R++ P R          T NR+T   A R    G    G T H  R T ST  NE G
Sbjct: 290 GGSRFVLPSRYEPDKCMSNATLNRVTQLVAARAKEKGLPLDGFTVHDLRRTGSTILNELG 349

Query: 353 FRPDAIERQLAHVESNKVRATYNKALLLDQRRSLLQAWAGYLSA 396
           F  D IE+ LAH +    R  YNKA   +QRR +LQ WA  + A
Sbjct: 350 FNSDWIEKCLAHEDGRSSRGVYNKAEYAEQRRHMLQEWADMIDA 393