Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 412 a.a., DUF4102 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  187 bits (475), Expect = 5e-52
 Identities = 126/396 (31%), Positives = 191/396 (48%), Gaps = 14/396 (3%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQVSLA 65
           LTD ++K+ KPAD+  KL+DGGG+FLLV P   + WR KYR  GKE L A+G +P V++ 
Sbjct: 3   LTDLQIKAAKPADKPIKLADGGGMFLLVTPQDQRYWRLKYRFGGKEKLLALGVYPDVTIK 62

Query: 66  EARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIKPVF 125
            AR  R+ A+  +  GI P+  R+  K   L            SF  VA+ + A+    +
Sbjct: 63  TARQLRDDAKKQLANGIDPSDARKAKKSSQL-------LDGPDSFENVAREWFAKNVATW 115

Query: 126 AHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAWAAIH-VKGDLSAIF 184
           A +       R+   + P     P+  I    I  +  + +A GA    H    +   I 
Sbjct: 116 AETHSSKVLQRLESDVFPLIGTKPIGSITAPMILAVARKIEARGANDTAHRAVQNAGQIM 175

Query: 185 EFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQ-IQKFYQALRGYRGYPETALCLRL 243
            +AV  G  E +P   LRG L     +  AA+T  + + +  +A   + G       L+L
Sbjct: 176 RYAVATGRAERDPTGDLRGALPPVRHKHFAALTDPKLVGELLRAFDAFEGTVVVKAALQL 235

Query: 244 IALTACRPGEAADAEWEEFDFEDAVWRRPAAKMKARR--EHVSPLSAQAIAVLKDLQRIT 301
             L   RPGE   A+W + D +   W   A+K +     EH+ PLS QA+ +L+DL + T
Sbjct: 236 APLVFVRPGELRKAKWADIDLDAGSWAFHASKARKGETIEHLVPLSTQAVEILRDLHQYT 295

Query: 302 GGGRYLFPHRSGKGFTTPNRLTYAMRDMNLGRGT--TPHCWRTTFST-WANENGFRPDAI 358
           G    LFP R  +   +   +  A+R +     T  T H +R    T  A + G  P  I
Sbjct: 296 GNRECLFPGRDPRKPMSEAAVNAALRRLGYDTKTEITGHGFRAMARTILAEQLGEDPHVI 355

Query: 359 ERQLAHVESNKVRATYNKALLLDQRRSLLQAWAGYL 394
           E+QLAH   + +   YN+   ++QRR+++Q W+ YL
Sbjct: 356 EQQLAHRVPDALGRAYNRTKYIEQRRAMMQRWSDYL 391