Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 423 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  170 bits (431), Expect = 6e-47
 Identities = 122/409 (29%), Positives = 199/409 (48%), Gaps = 31/409 (7%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQVSLA 65
           L D K++++KP     KLSD  GL+L VKP G +LW ++Y   GKE   A+G++P +SL+
Sbjct: 3   LNDTKIRNLKPPVTPIKLSDSHGLYLHVKPTGSRLWYFRYYFFGKETRIALGAYPLISLS 62

Query: 66  EARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIKPVF 125
           EAR  R++ R L+ Q I+P  +R         A  +  R+   +F  VA ++    +   
Sbjct: 63  EARQKRDELRKLLAQNINPTQQR---------AAEKAARSPAKNFKTVALSWHKSNRTWS 113

Query: 126 AHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAW-AAIHVKGDLSAIF 184
            + + R   S +  ++ P    +P++++  +    LL+  +  G    A   +  +  I 
Sbjct: 114 ENHAARLLAS-MNNHIFPIIGHLPITELKTRHFIDLLKGIEKKGLLEVAARTRQHMCNIM 172

Query: 185 EFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYR-GYPETALCLRL 243
             AV + L+E NP  +L G++  P      A+  E++ +   ++  Y+ G   T L + L
Sbjct: 173 RHAVHQELIEHNPAANLDGIIAPPVKRHYPALLLERLPELLASIEDYKQGRELTRLAVSL 232

Query: 244 IALTACRPGEAADAEWEEFDFEDAVWRRPAAK------------MKARREHVSPLSAQAI 291
                 R  E   A W E DF + +W  PA +             K R  H+ PLS Q+I
Sbjct: 233 TLHLFIRSSELRFARWSEIDFRNKIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQSI 292

Query: 292 AVLKDLQRITGGGRYLFP--HRSGKGFTTPNRLTYAMRDMNLGR--GTTPHCWRTTFSTW 347
            +LK ++ I+G    +FP  H   K     N +  A+R M          H +R    + 
Sbjct: 293 TILKQIREISGHQELIFPGDHNPYKPM-CENTVNKALRLMGYDTKDEICGHGFRAMACSA 351

Query: 348 ANENG-FRPDAIERQLAHVESNKVRATY-NKALLLDQRRSLLQAWAGYL 394
             E+G +  DA+ERQ++H E N VRA Y +KA  LD R++++Q W+ YL
Sbjct: 352 LMESGLWAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYL 400