Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 427 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  178 bits (451), Expect = 3e-49
 Identities = 129/410 (31%), Positives = 202/410 (49%), Gaps = 33/410 (8%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQVSLA 65
           L D+K++++K   + +K+SD  GL+LL+ P G +LW  KYR+  KE+   +G++P VSLA
Sbjct: 3   LNDSKIRNLKSLAKPFKVSDSHGLYLLINPGGSRLWYLKYRINKKESRLGLGTYPDVSLA 62

Query: 66  EARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQ-ESSFAKVAQAYLAEIKPV 124
           +AR  R+  R L+ Q I+PA +R           AER  +  E +F  VA ++    +  
Sbjct: 63  DARQQRDGIRKLLAQNINPAQQRS----------AERTTSSPEKTFKTVALSWHKSNRTW 112

Query: 125 FAHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAW-AAIHVKGDLSAI 183
             + + R   S +  ++ P     P++++  +    LL+  +  G    A   +  L  I
Sbjct: 113 SENHATRLLAS-MNNHIFPVIGHQPVTELKPRHFIELLKGIEKKGLLEVAARTRQHLCNI 171

Query: 184 FEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYR-GYPETALCLR 242
              AV + L+E NP  +L G++  P      A+  EQ+ +    + GYR G   T L + 
Sbjct: 172 MRHAVHQELIEHNPAANLDGIIATPVKRHYPALPLEQLPELLTRIEGYRQGRELTRLAVL 231

Query: 243 LIALTACRPGEAADAEWEEFDFEDAVWRRPAAK------------MKARREHVSPLSAQA 290
           L      R  E   A W E DF + +W  PA +             K R  H+ PLS QA
Sbjct: 232 LTLHLFIRSSELRFARWSEIDFRNHIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQA 291

Query: 291 IAVLKDLQRITGGGRYLFP--HRSGKGFTTPNRLTYAMRDM--NLGRGTTPHCWRTTFST 346
           IA+LK ++ I+G    +FP  H   K     N +  A+R M  +       H +R    +
Sbjct: 292 IAILKQIREISGHQVLVFPGDHNPYKPM-CENTVNKALRLMGYDTQNNICGHGFRAMACS 350

Query: 347 WANENG-FRPDAIERQLAHVESNKVRATY-NKALLLDQRRSLLQAWAGYL 394
              E+G +  DA+ERQ++H E N VRA Y  KA  LD R++++Q W+ YL
Sbjct: 351 ALMESGLWSQDAVERQMSHQERNSVRAAYIQKAEYLDARKAMMQWWSDYL 400